Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC023449.1-201ENST00000454464 154 ntBASIC1.64□□□□□ -2.15
CDH12P55289 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
CDH12P55289 AC114811.1-201ENST00000507207 168 ntBASIC1.64□□□□□ -2.15
CDH12P55289 AC074198.2-201ENST00000508153 258 ntBASIC1.64□□□□□ -2.15
CDH12P55289 SNORD45.4-201ENST00000516629 73 ntBASIC1.64□□□□□ -2.15
CDH12P55289 Y_RNA.714-201ENST00000517065 90 ntBASIC1.64□□□□□ -2.15
CDH12P55289 AC087685.1-201ENST00000587507 141 ntBASIC1.64□□□□□ -2.15
CDH12P55289 AC098479.1-201ENST00000609225 154 ntBASIC1.64□□□□□ -2.15
CDH12P55289 AL513423.1-201ENST00000621695 132 ntBASIC1.64□□□□□ -2.15
CDH12P55289 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CDH12P55289 RNU6-1084P-201ENST00000362498 107 ntBASIC1.63□□□□□ -2.15
CDH12P55289 SNORD45.3-201ENST00000363836 72 ntBASIC1.63□□□□□ -2.15
CDH12P55289 RNU6-1138P-201ENST00000365359 106 ntBASIC1.63□□□□□ -2.15
CDH12P55289 RNU6-484P-201ENST00000384016 107 ntBASIC1.63□□□□□ -2.15
CDH12P55289 CYCTP-201ENST00000504253 315 ntBASIC1.63□□□□□ -2.15
CDH12P55289 MRPS18CP4-201ENST00000535821 231 ntBASIC1.63□□□□□ -2.15
CDH12P55289 Pinc.1-201ENST00000616452 154 ntBASIC1.63□□□□□ -2.15
CDH12P55289 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
CDH12P55289 Y_RNA.240-201ENST00000364469 95 ntBASIC1.62□□□□□ -2.15
CDH12P55289 snoU2-30.1-201ENST00000365012 70 ntBASIC1.62□□□□□ -2.15
CDH12P55289 RNU6-163P-201ENST00000384396 106 ntBASIC1.62□□□□□ -2.15
CDH12P55289 Y_RNA.486-201ENST00000384398 107 ntBASIC1.62□□□□□ -2.15
CDH12P55289 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
CDH12P55289 MIR660-201ENST00000385235 97 ntBASIC1.62□□□□□ -2.15
CDH12P55289 RPL30P13-201ENST00000418873 348 ntBASIC1.62□□□□□ -2.15
CDH12P55289 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
CDH12P55289 JTBP1-201ENST00000441314 247 ntBASIC1.62□□□□□ -2.15
CDH12P55289 AC093850.1-201ENST00000454121 251 ntBASIC1.62□□□□□ -2.15
CDH12P55289 RNU7-12P-201ENST00000516030 62 ntBASIC1.62□□□□□ -2.15
CDH12P55289 MIR4778-201ENST00000577635 80 ntBASIC1.62□□□□□ -2.15
CDH12P55289 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
CDH12P55289 AC027279.3-201ENST00000625055 122 ntBASIC1.62□□□□□ -2.15
CDH12P55289 RNU6-414P-201ENST00000363705 104 ntBASIC1.61□□□□□ -2.15
CDH12P55289 RNU6-728P-201ENST00000365375 104 ntBASIC1.61□□□□□ -2.15
CDH12P55289 RNU6-886P-201ENST00000384319 105 ntBASIC1.61□□□□□ -2.15
CDH12P55289 MIR15B-201ENST00000385045 98 ntBASIC1.61□□□□□ -2.15
CDH12P55289 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CDH12P55289 RNU2-55P-201ENST00000411146 174 ntBASIC1.61□□□□□ -2.15
CDH12P55289 RNU5E-9P-201ENST00000411164 104 ntBASIC1.61□□□□□ -2.15
CDH12P55289 AC004965.1-201ENST00000413033 213 ntBASIC1.61□□□□□ -2.15
CDH12P55289 SNRPGP14-201ENST00000435400 219 ntBASIC1.61□□□□□ -2.15
CDH12P55289 AL121914.1-201ENST00000450188 156 ntBASIC1.61□□□□□ -2.15
CDH12P55289 RPL23AP42-201ENST00000471152 471 ntBASIC1.61□□□□□ -2.15
CDH12P55289 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.61□□□□□ -2.15
CDH12P55289 SNORD3E-202ENST00000627253 216 ntBASIC1.61□□□□□ -2.15
CDH12P55289 Y_RNA.23-201ENST00000362496 106 ntBASIC1.6□□□□□ -2.15
CDH12P55289 Y_RNA.91-201ENST00000363042 107 ntBASIC1.6□□□□□ -2.15
CDH12P55289 RNU6-833P-201ENST00000363486 107 ntBASIC1.6□□□□□ -2.15
CDH12P55289 SNORD14E-201ENST00000364009 85 ntBASIC1.6□□□□□ -2.15
CDH12P55289 Y_RNA.270-201ENST00000364693 104 ntBASIC1.6□□□□□ -2.15
CDH12P55289 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
CDH12P55289 MIR891A-201ENST00000401237 79 ntBASIC1.6□□□□□ -2.15
CDH12P55289 MIR548I3-201ENST00000408378 149 ntBASIC1.6□□□□□ -2.15
CDH12P55289 MIR548I1-201ENST00000408810 149 ntBASIC1.6□□□□□ -2.15
CDH12P55289 RNU4-43P-201ENST00000410628 137 ntBASIC1.6□□□□□ -2.15
CDH12P55289 Y_RNA.662-201ENST00000516028 97 ntBASIC1.6□□□□□ -2.15
CDH12P55289 RNA5SP182-201ENST00000516064 82 ntBASIC1.6□□□□□ -2.15
CDH12P55289 RNU6-1299P-201ENST00000516316 100 ntBASIC1.6□□□□□ -2.15
CDH12P55289 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH12P55289 RNU6-1123P-201ENST00000362347 106 ntBASIC1.59□□□□□ -2.15
CDH12P55289 RNU6-312P-201ENST00000364629 107 ntBASIC1.59□□□□□ -2.15
CDH12P55289 Y_RNA.432-201ENST00000384087 111 ntBASIC1.59□□□□□ -2.15
CDH12P55289 SNORA70B-201ENST00000384210 135 ntBASIC1.59□□□□□ -2.15
CDH12P55289 Y_RNA.555-201ENST00000384673 110 ntBASIC1.59□□□□□ -2.15
CDH12P55289 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CDH12P55289 SEPT7P4-201ENST00000437076 306 ntBASIC1.59□□□□□ -2.15
CDH12P55289 HMGN2P23-201ENST00000456759 269 ntBASIC1.59□□□□□ -2.15
CDH12P55289 RPL23AP94-201ENST00000512518 302 ntBASIC1.59□□□□□ -2.15
CDH12P55289 SUMO2P16-201ENST00000519475 264 ntBASIC1.59□□□□□ -2.15
CDH12P55289 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH12P55289 MIR4662B-201ENST00000579498 81 ntBASIC1.59□□□□□ -2.15
CDH12P55289 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.15
CDH12P55289 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CDH12P55289 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDH12P55289 ICE2P2-201ENST00000483823 2787 ntBASIC1.58□□□□□ -2.16
CDH12P55289 SNORD114-1-201ENST00000362705 72 ntBASIC1.58□□□□□ -2.16
CDH12P55289 RNU6-268P-201ENST00000364174 107 ntBASIC1.58□□□□□ -2.16
CDH12P55289 Y_RNA.634-201ENST00000364811 113 ntBASIC1.58□□□□□ -2.16
CDH12P55289 Y_RNA.336-201ENST00000365307 109 ntBASIC1.58□□□□□ -2.16
CDH12P55289 RNU6-442P-201ENST00000383968 104 ntBASIC1.58□□□□□ -2.16
CDH12P55289 SNORA40.18-201ENST00000391200 128 ntBASIC1.58□□□□□ -2.16
CDH12P55289 MIR1267-201ENST00000408723 78 ntBASIC1.58□□□□□ -2.16
CDH12P55289 AC005908.1-201ENST00000468701 347 ntBASIC1.58□□□□□ -2.16
CDH12P55289 RNU1-41P-201ENST00000516161 162 ntBASIC1.58□□□□□ -2.16
CDH12P55289 RNU1-48P-201ENST00000516400 162 ntBASIC1.58□□□□□ -2.16
CDH12P55289 RNU6-197P-201ENST00000516680 100 ntBASIC1.58□□□□□ -2.16
CDH12P55289 MIR4431-201ENST00000579990 94 ntBASIC1.58□□□□□ -2.16
CDH12P55289 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
CDH12P55289 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CDH12P55289 RNU6-457P-201ENST00000363999 107 ntBASIC1.57□□□□□ -2.16
CDH12P55289 RNU6-643P-201ENST00000384018 107 ntBASIC1.57□□□□□ -2.16
CDH12P55289 MIR802-201ENST00000390235 94 ntBASIC1.57□□□□□ -2.16
CDH12P55289 RNU2-70P-201ENST00000410718 179 ntBASIC1.57□□□□□ -2.16
CDH12P55289 HMGN2P32-201ENST00000444648 269 ntBASIC1.57□□□□□ -2.16
CDH12P55289 Y_RNA.666-201ENST00000516187 112 ntBASIC1.57□□□□□ -2.16
CDH12P55289 RNA5SP153-201ENST00000516498 76 ntBASIC1.57□□□□□ -2.16
CDH12P55289 AL160236.1-201ENST00000556317 195 ntBASIC1.57□□□□□ -2.16
CDH12P55289 AC097639.2-201ENST00000603159 172 ntBASIC1.57□□□□□ -2.16
CDH12P55289 AC006441.5-201ENST00000612680 209 ntBASIC1.57□□□□□ -2.16
CDH12P55289 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms