Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 MIR616-201ENST00000385293 97 ntBASIC1.89□□□□□ -2.11
HOXD12P35452 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HOXD12P35452 MLLT10P1-201ENST00000418346 262 ntBASIC1.89□□□□□ -2.11
HOXD12P35452 SNORA31.10-201ENST00000516482 106 ntBASIC1.89□□□□□ -2.11
HOXD12P35452 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
HOXD12P35452 RNU6-861P-201ENST00000516745 106 ntBASIC1.89□□□□□ -2.11
HOXD12P35452 AC098479.1-201ENST00000609225 154 ntBASIC1.89□□□□□ -2.11
HOXD12P35452 AL591926.4-201ENST00000616895 298 ntBASIC1.89□□□□□ -2.11
HOXD12P35452 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.88□□□□□ -2.11
HOXD12P35452 MIR424-201ENST00000362227 98 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 MIR126-201ENST00000362291 85 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 SNORD68-201ENST00000363214 84 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 Y_RNA.121-201ENST00000363309 113 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 Y_RNA.182-201ENST00000363880 111 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 Y_RNA.270-201ENST00000364693 104 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 Y_RNA.435-201ENST00000384095 112 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 Y_RNA.587-201ENST00000391210 103 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 MIR1287-201ENST00000408492 90 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 MIR1267-201ENST00000408723 78 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXD12P35452 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.88□□□□□ -2.11
HOXD12P35452 SNRPGP10-201ENST00000432323 225 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 AC023449.1-201ENST00000454464 154 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 Y_RNA.797-201ENST00000515977 94 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 MIR4744-201ENST00000581563 82 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 AL049861.1-201ENST00000603130 150 ntBASIC1.88□□□□□ -2.11
HOXD12P35452 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.88□□□□□ -2.11
HOXD12P35452 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HOXD12P35452 Y_RNA.150-201ENST00000363562 102 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 RNU6-682P-201ENST00000363843 106 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 SNORA17.3-201ENST00000391159 129 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 RNA5SP482-201ENST00000391269 118 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 AL606845.1-201ENST00000404881 255 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 RN7SKP200-201ENST00000410564 320 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 RN7SKP101-201ENST00000411376 320 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 HSPE1P9-201ENST00000440046 311 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 STAG3L5P-204ENST00000443759 179 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 RNU7-28P-201ENST00000516759 62 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXD12P35452 MIR4285-201ENST00000581001 85 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 AL391903.3-201ENST00000612158 163 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 FTX_2.1-201ENST00000618816 94 ntBASIC1.87□□□□□ -2.11
HOXD12P35452 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
HOXD12P35452 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXD12P35452 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HOXD12P35452 RNU6-950P-201ENST00000384651 107 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 SNORA12.1-201ENST00000390873 148 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 RNU6-1228P-201ENST00000391014 107 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 RN7SKP51-201ENST00000410781 304 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 SNORD11-201ENST00000459124 84 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 RNU6-1219P-201ENST00000516143 112 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 SNORA28-201ENST00000606769 126 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 AL021707.8-201ENST00000609428 183 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 AC084768.2-201ENST00000622736 221 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 U6.106-201ENST00000636360 105 ntBASIC1.86□□□□□ -2.11
HOXD12P35452 RNU6-439P-201ENST00000384188 106 ntBASIC1.85□□□□□ -2.11
HOXD12P35452 RNU6-578P-201ENST00000390980 103 ntBASIC1.85□□□□□ -2.11
HOXD12P35452 RNU6-321P-201ENST00000410912 106 ntBASIC1.85□□□□□ -2.11
HOXD12P35452 RNU7-34P-201ENST00000459394 64 ntBASIC1.85□□□□□ -2.11
HOXD12P35452 Y_RNA.662-201ENST00000516028 97 ntBASIC1.85□□□□□ -2.11
HOXD12P35452 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXD12P35452 AC108706.1-201ENST00000611053 297 ntBASIC1.85□□□□□ -2.11
HOXD12P35452 uc_338.4-201ENST00000616635 176 ntBASIC1.85□□□□□ -2.11
HOXD12P35452 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXD12P35452 RNU6-457P-201ENST00000363999 107 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 Y_RNA.412-201ENST00000384001 104 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 MIR522-201ENST00000385071 87 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 RNU6-131P-201ENST00000391144 107 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 AL627390.1-201ENST00000396055 340 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 AL034345.1-201ENST00000407768 123 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 OR9P1P-201ENST00000496431 281 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 RNU6-561P-201ENST00000516222 102 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 Y_RNA.714-201ENST00000517065 90 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 MIR4709-201ENST00000577272 72 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 AL359821.1-201ENST00000605519 182 ntBASIC1.84□□□□□ -2.11
HOXD12P35452 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXD12P35452 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HOXD12P35452 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HOXD12P35452 RNU6-209P-201ENST00000384118 107 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 RNY3P5-201ENST00000384127 102 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 RNU6-886P-201ENST00000384319 105 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 RNU6-1031P-201ENST00000384773 107 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 Y_RNA.622-201ENST00000411091 108 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 BTF3P4-201ENST00000418852 495 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 JTBP1-201ENST00000441314 247 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 AL121914.1-201ENST00000450188 156 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 SNORD13-201ENST00000459299 104 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 NDUFA4P2-201ENST00000489989 244 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 AC109810.1-201ENST00000534066 224 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 MRPS18CP4-201ENST00000535821 231 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
HOXD12P35452 RNU6-1084P-201ENST00000362498 107 ntBASIC1.82□□□□□ -2.12
HOXD12P35452 Y_RNA.75-201ENST00000362927 97 ntBASIC1.82□□□□□ -2.12
HOXD12P35452 Y_RNA.240-201ENST00000364469 95 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms