Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPM3O75607 AC092435.3-201ENST00000565538 3654 ntBASIC4.83□□□□□ -1.64
NPM3O75607 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPM3O75607 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPM3O75607 RNU1-15P-201ENST00000353977 144 ntBASIC4.83□□□□□ -1.64
NPM3O75607 MIR23B-201ENST00000384832 97 ntBASIC4.83□□□□□ -1.64
NPM3O75607 MIR554-201ENST00000384874 96 ntBASIC4.83□□□□□ -1.64
NPM3O75607 RNU6-205P-201ENST00000390858 107 ntBASIC4.83□□□□□ -1.64
NPM3O75607 SNORA59A-201ENST00000459326 152 ntBASIC4.83□□□□□ -1.64
NPM3O75607 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.83□□□□□ -1.64
NPM3O75607 MIR5685-201ENST00000579080 79 ntBASIC4.83□□□□□ -1.64
NPM3O75607 MIR4429-201ENST00000580105 73 ntBASIC4.83□□□□□ -1.64
NPM3O75607 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPM3O75607 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPM3O75607 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPM3O75607 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPM3O75607 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPM3O75607 RNU6-112P-201ENST00000363599 104 ntBASIC4.82□□□□□ -1.64
NPM3O75607 RNU6-141P-201ENST00000410499 105 ntBASIC4.82□□□□□ -1.64
NPM3O75607 RPL29P14-201ENST00000495837 428 ntBASIC4.82□□□□□ -1.64
NPM3O75607 RNU6-322P-201ENST00000516010 103 ntBASIC4.82□□□□□ -1.64
NPM3O75607 RNU7-143P-201ENST00000516781 65 ntBASIC4.82□□□□□ -1.64
NPM3O75607 RNA5SP137-201ENST00000516833 135 ntBASIC4.82□□□□□ -1.64
NPM3O75607 AC100770.1-201ENST00000532310 322 ntBASIC4.82□□□□□ -1.64
NPM3O75607 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NPM3O75607 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPM3O75607 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPM3O75607 RNU4-82P-201ENST00000362443 140 ntBASIC4.81□□□□□ -1.64
NPM3O75607 SNORA67.4-201ENST00000384688 142 ntBASIC4.81□□□□□ -1.64
NPM3O75607 MIR588-201ENST00000384900 83 ntBASIC4.81□□□□□ -1.64
NPM3O75607 RNA5SP372-201ENST00000390836 115 ntBASIC4.81□□□□□ -1.64
NPM3O75607 RNU6ATAC-201ENST00000408749 126 ntBASIC4.81□□□□□ -1.64
NPM3O75607 AC023632.4-201ENST00000517783 191 ntBASIC4.81□□□□□ -1.64
NPM3O75607 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.81□□□□□ -1.64
NPM3O75607 AC027290.2-201ENST00000623210 18662 ntBASIC4.81□□□□□ -1.64
NPM3O75607 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPM3O75607 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.81□□□□□ -1.64
NPM3O75607 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NPM3O75607 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NPM3O75607 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPM3O75607 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPM3O75607 RNY4P3-201ENST00000365254 95 ntBASIC4.8□□□□□ -1.64
NPM3O75607 AL359837.1-201ENST00000381357 287 ntBASIC4.8□□□□□ -1.64
NPM3O75607 HMGN2P3-201ENST00000433603 273 ntBASIC4.8□□□□□ -1.64
NPM3O75607 HMGN2P5-201ENST00000436882 273 ntBASIC4.8□□□□□ -1.64
NPM3O75607 AC104389.3-201ENST00000445629 235 ntBASIC4.8□□□□□ -1.64
NPM3O75607 RNU7-26P-201ENST00000458980 63 ntBASIC4.8□□□□□ -1.64
NPM3O75607 AC091153.1-201ENST00000466297 402 ntBASIC4.8□□□□□ -1.64
NPM3O75607 AC025627.2-201ENST00000576220 160 ntBASIC4.8□□□□□ -1.64
NPM3O75607 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPM3O75607 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPM3O75607 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.8□□□□□ -1.64
NPM3O75607 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
NPM3O75607 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPM3O75607 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPM3O75607 RNU6-895P-201ENST00000384125 103 ntBASIC4.79□□□□□ -1.64
NPM3O75607 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.79□□□□□ -1.64
NPM3O75607 AC009474.2-201ENST00000451383 136 ntBASIC4.79□□□□□ -1.64
NPM3O75607 RNA5SP103-201ENST00000459503 118 ntBASIC4.79□□□□□ -1.64
NPM3O75607 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
NPM3O75607 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPM3O75607 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NPM3O75607 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPM3O75607 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NPM3O75607 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.78□□□□□ -1.64
NPM3O75607 RNA5SP48-201ENST00000363969 126 ntBASIC4.78□□□□□ -1.64
NPM3O75607 RNU6-681P-201ENST00000364012 104 ntBASIC4.78□□□□□ -1.64
NPM3O75607 RNU6-630P-201ENST00000391258 106 ntBASIC4.78□□□□□ -1.64
NPM3O75607 MIR1283-2-201ENST00000408621 87 ntBASIC4.78□□□□□ -1.64
NPM3O75607 AC244023.1-201ENST00000426884 112 ntBASIC4.78□□□□□ -1.64
NPM3O75607 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC4.78□□□□□ -1.64
NPM3O75607 CYCSP30-201ENST00000546447 172 ntBASIC4.78□□□□□ -1.64
NPM3O75607 AC242498.1-201ENST00000604134 111 ntBASIC4.78□□□□□ -1.64
NPM3O75607 MIR92B-201ENST00000607575 96 ntBASIC4.78□□□□□ -1.64
NPM3O75607 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NPM3O75607 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NPM3O75607 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPM3O75607 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPM3O75607 Y_RNA.42-201ENST00000362660 108 ntBASIC4.77□□□□□ -1.65
NPM3O75607 SNORA25.4-201ENST00000363666 124 ntBASIC4.77□□□□□ -1.65
NPM3O75607 MIR9-2-201ENST00000384838 87 ntBASIC4.77□□□□□ -1.65
NPM3O75607 MIR627-201ENST00000384979 97 ntBASIC4.77□□□□□ -1.65
NPM3O75607 MIR563-201ENST00000385080 79 ntBASIC4.77□□□□□ -1.65
NPM3O75607 RNA5SP171-201ENST00000391071 115 ntBASIC4.77□□□□□ -1.65
NPM3O75607 MIR6075-201ENST00000620782 95 ntBASIC4.77□□□□□ -1.65
NPM3O75607 MAPK10-362ENST00000641864 4484 ntBASIC4.77□□□□□ -1.65
NPM3O75607 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NPM3O75607 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPM3O75607 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPM3O75607 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPM3O75607 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPM3O75607 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.76□□□□□ -1.65
NPM3O75607 SNORA62.3-201ENST00000365110 153 ntBASIC4.76□□□□□ -1.65
NPM3O75607 RNU1-138P-201ENST00000384093 164 ntBASIC4.76□□□□□ -1.65
NPM3O75607 RNU7-41P-201ENST00000515917 61 ntBASIC4.76□□□□□ -1.65
NPM3O75607 AC006023.1-201ENST00000603944 259 ntBASIC4.76□□□□□ -1.65
NPM3O75607 MIR432-201ENST00000606207 94 ntBASIC4.76□□□□□ -1.65
NPM3O75607 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.76□□□□□ -1.65
NPM3O75607 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPM3O75607 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms