Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 RNU4-53P-201ENST00000410828 140 ntBASIC1.85□□□□□ -2.11
RRP9O43818 Y_RNA.622-201ENST00000411091 108 ntBASIC1.85□□□□□ -2.11
RRP9O43818 RN7SKP192-201ENST00000411291 327 ntBASIC1.85□□□□□ -2.11
RRP9O43818 AL121914.1-201ENST00000450188 156 ntBASIC1.85□□□□□ -2.11
RRP9O43818 AC114811.1-201ENST00000507207 168 ntBASIC1.85□□□□□ -2.11
RRP9O43818 IGKV3-31-201ENST00000523109 329 ntBASIC1.85□□□□□ -2.11
RRP9O43818 Pinc.1-201ENST00000616452 154 ntBASIC1.85□□□□□ -2.11
RRP9O43818 SNORD3E-202ENST00000627253 216 ntBASIC1.85□□□□□ -2.11
RRP9O43818 U6.106-201ENST00000636360 105 ntBASIC1.85□□□□□ -2.11
RRP9O43818 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RRP9O43818 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RRP9O43818 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.84□□□□□ -2.11
RRP9O43818 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.84□□□□□ -2.11
RRP9O43818 SNORD45.3-201ENST00000363836 72 ntBASIC1.84□□□□□ -2.11
RRP9O43818 RNU6-442P-201ENST00000383968 104 ntBASIC1.84□□□□□ -2.11
RRP9O43818 RNU6-203P-201ENST00000384038 104 ntBASIC1.84□□□□□ -2.11
RRP9O43818 Y_RNA.432-201ENST00000384087 111 ntBASIC1.84□□□□□ -2.11
RRP9O43818 MIR15B-201ENST00000385045 98 ntBASIC1.84□□□□□ -2.11
RRP9O43818 SNORD72-201ENST00000390994 80 ntBASIC1.84□□□□□ -2.11
RRP9O43818 MIR891A-201ENST00000401237 79 ntBASIC1.84□□□□□ -2.11
RRP9O43818 MIR1267-201ENST00000408723 78 ntBASIC1.84□□□□□ -2.11
RRP9O43818 AL356320.1-201ENST00000429616 163 ntBASIC1.84□□□□□ -2.11
RRP9O43818 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.84□□□□□ -2.11
RRP9O43818 Y_RNA.662-201ENST00000516028 97 ntBASIC1.84□□□□□ -2.11
RRP9O43818 RNU7-12P-201ENST00000516030 62 ntBASIC1.84□□□□□ -2.11
RRP9O43818 RNU6-1299P-201ENST00000516316 100 ntBASIC1.84□□□□□ -2.11
RRP9O43818 RNU6-1116P-201ENST00000517269 99 ntBASIC1.84□□□□□ -2.11
RRP9O43818 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
RRP9O43818 MIR6873-201ENST00000622788 63 ntBASIC1.84□□□□□ -2.11
RRP9O43818 Y_RNA.23-201ENST00000362496 106 ntBASIC1.83□□□□□ -2.12
RRP9O43818 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
RRP9O43818 Y_RNA.240-201ENST00000364469 95 ntBASIC1.83□□□□□ -2.12
RRP9O43818 Y_RNA.336-201ENST00000365307 109 ntBASIC1.83□□□□□ -2.12
RRP9O43818 MIR150-201ENST00000385048 84 ntBASIC1.83□□□□□ -2.12
RRP9O43818 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RRP9O43818 SNORA79-201ENST00000408376 140 ntBASIC1.83□□□□□ -2.12
RRP9O43818 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.83□□□□□ -2.12
RRP9O43818 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
RRP9O43818 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
RRP9O43818 AL590808.1-201ENST00000618696 141 ntBASIC1.83□□□□□ -2.12
RRP9O43818 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.83□□□□□ -2.12
RRP9O43818 RNU6-312P-201ENST00000364629 107 ntBASIC1.82□□□□□ -2.12
RRP9O43818 RNU6-484P-201ENST00000384016 107 ntBASIC1.82□□□□□ -2.12
RRP9O43818 MIR194-1-201ENST00000384892 85 ntBASIC1.82□□□□□ -2.12
RRP9O43818 SNORA26-201ENST00000391286 122 ntBASIC1.82□□□□□ -2.12
RRP9O43818 RNA5SP425-201ENST00000410336 112 ntBASIC1.82□□□□□ -2.12
RRP9O43818 RNU4-43P-201ENST00000410628 137 ntBASIC1.82□□□□□ -2.12
RRP9O43818 AC004965.1-201ENST00000413033 213 ntBASIC1.82□□□□□ -2.12
RRP9O43818 AL161935.2-201ENST00000414627 60 ntBASIC1.82□□□□□ -2.12
RRP9O43818 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.82□□□□□ -2.12
RRP9O43818 SNRPGP8-201ENST00000454064 226 ntBASIC1.82□□□□□ -2.12
RRP9O43818 RNU6-561P-201ENST00000516222 102 ntBASIC1.82□□□□□ -2.12
RRP9O43818 RNA5SP281-201ENST00000516504 135 ntBASIC1.82□□□□□ -2.12
RRP9O43818 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
RRP9O43818 Y_RNA.555-201ENST00000384673 110 ntBASIC1.81□□□□□ -2.12
RRP9O43818 MIR320A-201ENST00000385302 82 ntBASIC1.81□□□□□ -2.12
RRP9O43818 RNU2-70P-201ENST00000410718 179 ntBASIC1.81□□□□□ -2.12
RRP9O43818 RNA5SP153-201ENST00000516498 76 ntBASIC1.81□□□□□ -2.12
RRP9O43818 RNU6-197P-201ENST00000516680 100 ntBASIC1.81□□□□□ -2.12
RRP9O43818 SNORA44.1-201ENST00000517031 108 ntBASIC1.81□□□□□ -2.12
RRP9O43818 MIR4778-201ENST00000577635 80 ntBASIC1.81□□□□□ -2.12
RRP9O43818 AC064859.1-201ENST00000624741 174 ntBASIC1.81□□□□□ -2.12
RRP9O43818 AC095038.3-201ENST00000634439 195 ntBASIC1.81□□□□□ -2.12
RRP9O43818 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RRP9O43818 Y_RNA.150-201ENST00000363562 102 ntBASIC1.8□□□□□ -2.12
RRP9O43818 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.8□□□□□ -2.12
RRP9O43818 RPL23AP94-201ENST00000512518 302 ntBASIC1.8□□□□□ -2.12
RRP9O43818 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
RRP9O43818 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.8□□□□□ -2.12
RRP9O43818 RNU6-643P-201ENST00000384018 107 ntBASIC1.79□□□□□ -2.12
RRP9O43818 RNU6-886P-201ENST00000384319 105 ntBASIC1.79□□□□□ -2.12
RRP9O43818 Y_RNA.486-201ENST00000384398 107 ntBASIC1.79□□□□□ -2.12
RRP9O43818 MIR452-201ENST00000385020 85 ntBASIC1.79□□□□□ -2.12
RRP9O43818 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
RRP9O43818 MT-TR-201ENST00000387439 65 ntBASIC1.79□□□□□ -2.12
RRP9O43818 AC093850.1-201ENST00000454121 251 ntBASIC1.79□□□□□ -2.12
RRP9O43818 AC005840.1-201ENST00000498412 377 ntBASIC1.79□□□□□ -2.12
RRP9O43818 RNU6-365P-201ENST00000517113 106 ntBASIC1.79□□□□□ -2.12
RRP9O43818 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
RRP9O43818 MIR4431-201ENST00000579990 94 ntBASIC1.79□□□□□ -2.12
RRP9O43818 RNA5SP289-201ENST00000362332 137 ntBASIC1.78□□□□□ -2.12
RRP9O43818 Y_RNA.634-201ENST00000364811 113 ntBASIC1.78□□□□□ -2.12
RRP9O43818 SNORD38C-201ENST00000384381 69 ntBASIC1.78□□□□□ -2.12
RRP9O43818 SNRPGP14-201ENST00000435400 219 ntBASIC1.78□□□□□ -2.12
RRP9O43818 SEPT7P4-201ENST00000437076 306 ntBASIC1.78□□□□□ -2.12
RRP9O43818 RPS29P23-201ENST00000458635 123 ntBASIC1.78□□□□□ -2.12
RRP9O43818 SNORA77B-201ENST00000578179 125 ntBASIC1.78□□□□□ -2.12
RRP9O43818 AC097639.2-201ENST00000603159 172 ntBASIC1.78□□□□□ -2.12
RRP9O43818 AC006441.5-201ENST00000612680 209 ntBASIC1.78□□□□□ -2.12
RRP9O43818 RNU6-199P-201ENST00000362954 107 ntBASIC1.77□□□□□ -2.13
RRP9O43818 Y_RNA.91-201ENST00000363042 107 ntBASIC1.77□□□□□ -2.13
RRP9O43818 RNU6-268P-201ENST00000364174 107 ntBASIC1.77□□□□□ -2.13
RRP9O43818 Y_RNA.357-201ENST00000365487 109 ntBASIC1.77□□□□□ -2.13
RRP9O43818 RNU6-209P-201ENST00000384118 107 ntBASIC1.77□□□□□ -2.13
RRP9O43818 MIR513A1-201ENST00000385138 129 ntBASIC1.77□□□□□ -2.13
RRP9O43818 PCNPP3-201ENST00000393579 471 ntBASIC1.77□□□□□ -2.13
RRP9O43818 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RRP9O43818 HMGN2P23-201ENST00000456759 269 ntBASIC1.77□□□□□ -2.13
RRP9O43818 AC074198.2-201ENST00000508153 258 ntBASIC1.77□□□□□ -2.13
RRP9O43818 AC107027.2-201ENST00000512197 115 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms