Protein–RNA interactions for Protein: O00213

APBB1, Amyloid-beta A4 precursor protein-binding family B member 1, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB1O00213 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.42□□□□□ -1.86
APBB1O00213 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
APBB1O00213 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APBB1O00213 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
APBB1O00213 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APBB1O00213 RNU6-755P-201ENST00000364400 103 ntBASIC3.41□□□□□ -1.86
APBB1O00213 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
APBB1O00213 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.41□□□□□ -1.86
APBB1O00213 RNU7-70P-201ENST00000516941 66 ntBASIC3.41□□□□□ -1.86
APBB1O00213 MIR3613-201ENST00000579844 87 ntBASIC3.41□□□□□ -1.86
APBB1O00213 MIR3945-201ENST00000581853 98 ntBASIC3.41□□□□□ -1.86
APBB1O00213 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.41□□□□□ -1.86
APBB1O00213 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.4□□□□□ -1.86
APBB1O00213 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
APBB1O00213 RNU6-950P-201ENST00000384651 107 ntBASIC3.4□□□□□ -1.87
APBB1O00213 AL138827.1-201ENST00000402666 306 ntBASIC3.4□□□□□ -1.87
APBB1O00213 RNU7-193P-201ENST00000516723 65 ntBASIC3.4□□□□□ -1.87
APBB1O00213 RNU6-690P-201ENST00000365242 106 ntBASIC3.39□□□□□ -1.87
APBB1O00213 Y_RNA.410-201ENST00000383992 113 ntBASIC3.39□□□□□ -1.87
APBB1O00213 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
APBB1O00213 RNA5SP508-201ENST00000411327 119 ntBASIC3.39□□□□□ -1.87
APBB1O00213 AC105272.1-201ENST00000438604 198 ntBASIC3.39□□□□□ -1.87
APBB1O00213 RNA5SP385-201ENST00000515947 110 ntBASIC3.39□□□□□ -1.87
APBB1O00213 SNORA18.7-201ENST00000516910 131 ntBASIC3.39□□□□□ -1.87
APBB1O00213 AC004486.1-201ENST00000546846 233 ntBASIC3.39□□□□□ -1.87
APBB1O00213 AC002984.1-201ENST00000591692 448 ntBASIC3.39□□□□□ -1.87
APBB1O00213 uc_338.28-201ENST00000612082 187 ntBASIC3.39□□□□□ -1.87
APBB1O00213 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
APBB1O00213 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APBB1O00213 MIR342-201ENST00000362212 99 ntBASIC3.38□□□□□ -1.87
APBB1O00213 RNU4-82P-201ENST00000362443 140 ntBASIC3.38□□□□□ -1.87
APBB1O00213 RNA5SP432-201ENST00000362480 116 ntBASIC3.38□□□□□ -1.87
APBB1O00213 Y_RNA.336-201ENST00000365307 109 ntBASIC3.38□□□□□ -1.87
APBB1O00213 SNORA4.2-201ENST00000365313 147 ntBASIC3.38□□□□□ -1.87
APBB1O00213 RNA5SP501-201ENST00000410990 112 ntBASIC3.38□□□□□ -1.87
APBB1O00213 RNA5SP184-201ENST00000411071 108 ntBASIC3.38□□□□□ -1.87
APBB1O00213 SNX2P2-201ENST00000424553 323 ntBASIC3.38□□□□□ -1.87
APBB1O00213 RNVU1-2-201ENST00000516326 135 ntBASIC3.38□□□□□ -1.87
APBB1O00213 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
APBB1O00213 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APBB1O00213 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APBB1O00213 MIR450A1-201ENST00000362262 91 ntBASIC3.37□□□□□ -1.87
APBB1O00213 MIR887-201ENST00000401258 79 ntBASIC3.37□□□□□ -1.87
APBB1O00213 MIR1261-201ENST00000408659 82 ntBASIC3.37□□□□□ -1.87
APBB1O00213 RNU6-938P-201ENST00000411285 103 ntBASIC3.37□□□□□ -1.87
APBB1O00213 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.37□□□□□ -1.87
APBB1O00213 HMGN2P32-201ENST00000444648 269 ntBASIC3.37□□□□□ -1.87
APBB1O00213 RNU6-113P-201ENST00000516653 101 ntBASIC3.37□□□□□ -1.87
APBB1O00213 SUB1P4-201ENST00000566062 339 ntBASIC3.37□□□□□ -1.87
APBB1O00213 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.37□□□□□ -1.87
APBB1O00213 SNORA28-201ENST00000606769 126 ntBASIC3.37□□□□□ -1.87
APBB1O00213 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.37□□□□□ -1.87
APBB1O00213 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APBB1O00213 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
APBB1O00213 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
APBB1O00213 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APBB1O00213 SNORA63D-201ENST00000364359 132 ntBASIC3.36□□□□□ -1.87
APBB1O00213 MIR520A-201ENST00000384862 85 ntBASIC3.36□□□□□ -1.87
APBB1O00213 AL590004.2-201ENST00000404787 371 ntBASIC3.36□□□□□ -1.87
APBB1O00213 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.36□□□□□ -1.87
APBB1O00213 AP003484.1-201ENST00000530974 250 ntBASIC3.36□□□□□ -1.87
APBB1O00213 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.36□□□□□ -1.87
APBB1O00213 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APBB1O00213 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APBB1O00213 MIR26A1-201ENST00000362205 77 ntBASIC3.35□□□□□ -1.87
APBB1O00213 SNORA25.6-201ENST00000364121 118 ntBASIC3.35□□□□□ -1.87
APBB1O00213 RNA5SP450-201ENST00000411206 102 ntBASIC3.35□□□□□ -1.87
APBB1O00213 MIR3605-201ENST00000583214 100 ntBASIC3.35□□□□□ -1.87
APBB1O00213 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APBB1O00213 AL596211.1-201ENST00000569873 2277 ntBASIC3.35□□□□□ -1.87
APBB1O00213 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.35□□□□□ -1.87
APBB1O00213 Y_RNA.440-201ENST00000384120 114 ntBASIC3.34□□□□□ -1.87
APBB1O00213 SNORD38C-201ENST00000384381 69 ntBASIC3.34□□□□□ -1.87
APBB1O00213 U8.16-201ENST00000391279 133 ntBASIC3.34□□□□□ -1.87
APBB1O00213 RN7SKP200-201ENST00000410564 320 ntBASIC3.34□□□□□ -1.87
APBB1O00213 SNORA9.3-201ENST00000516383 129 ntBASIC3.34□□□□□ -1.87
APBB1O00213 RNY4P20-201ENST00000516678 93 ntBASIC3.34□□□□□ -1.87
APBB1O00213 RNU2-19P-201ENST00000517288 84 ntBASIC3.34□□□□□ -1.87
APBB1O00213 MIR5194-201ENST00000582634 120 ntBASIC3.34□□□□□ -1.87
APBB1O00213 MIR4635-201ENST00000583759 79 ntBASIC3.34□□□□□ -1.87
APBB1O00213 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
APBB1O00213 ZNF720P1-201ENST00000562403 1939 ntBASIC3.33□□□□□ -1.88
APBB1O00213 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APBB1O00213 MIRLET7C-201ENST00000362160 84 ntBASIC3.33□□□□□ -1.88
APBB1O00213 Y_RNA.116-201ENST00000363292 103 ntBASIC3.33□□□□□ -1.88
APBB1O00213 RNU4-16P-201ENST00000364737 141 ntBASIC3.33□□□□□ -1.88
APBB1O00213 SNORA67.1-201ENST00000364749 141 ntBASIC3.33□□□□□ -1.88
APBB1O00213 RNU1-133P-201ENST00000364867 167 ntBASIC3.33□□□□□ -1.88
APBB1O00213 Y_RNA.351-201ENST00000365436 96 ntBASIC3.33□□□□□ -1.88
APBB1O00213 MIR196B-201ENST00000384852 84 ntBASIC3.33□□□□□ -1.88
APBB1O00213 MIR570-201ENST00000384917 97 ntBASIC3.33□□□□□ -1.88
APBB1O00213 RNU2-7P-201ENST00000410794 178 ntBASIC3.33□□□□□ -1.88
APBB1O00213 RNA5SP136-201ENST00000410906 107 ntBASIC3.33□□□□□ -1.88
APBB1O00213 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.33□□□□□ -1.88
APBB1O00213 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.33□□□□□ -1.88
APBB1O00213 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.33□□□□□ -1.88
APBB1O00213 AC007012.1-201ENST00000567192 175 ntBASIC3.33□□□□□ -1.88
APBB1O00213 AC021443.1-201ENST00000604478 211 ntBASIC3.33□□□□□ -1.88
APBB1O00213 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.32□□□□□ -1.88
APBB1O00213 Y_RNA.549-201ENST00000384657 102 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms