Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR4474-201ENST00000579189 78 ntBASIC3.35□□□□□ -1.87
H3BM21 SCARNA15.3-201ENST00000626315 122 ntBASIC3.35□□□□□ -1.87
H3BM21 SCARNA4.1-201ENST00000628597 123 ntBASIC3.35□□□□□ -1.87
H3BM21 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
H3BM21 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
H3BM21 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.34□□□□□ -1.87
H3BM21 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
H3BM21 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.34□□□□□ -1.87
H3BM21 RNU6-686P-201ENST00000364839 107 ntBASIC3.34□□□□□ -1.87
H3BM21 SNORA48.2-201ENST00000390926 124 ntBASIC3.34□□□□□ -1.87
H3BM21 MIR548G-201ENST00000408442 89 ntBASIC3.34□□□□□ -1.87
H3BM21 RNU6-519P-201ENST00000410590 108 ntBASIC3.34□□□□□ -1.87
H3BM21 AC115115.1-201ENST00000449927 248 ntBASIC3.34□□□□□ -1.87
H3BM21 RNU7-34P-201ENST00000459394 64 ntBASIC3.34□□□□□ -1.87
H3BM21 RNU6-557P-201ENST00000516842 110 ntBASIC3.34□□□□□ -1.87
H3BM21 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.87
H3BM21 AC103810.1-201ENST00000579873 453 ntBASIC3.34□□□□□ -1.87
H3BM21 AC020891.4-201ENST00000605745 93 ntBASIC3.34□□□□□ -1.87
H3BM21 AC103810.6-201ENST00000606708 136 ntBASIC3.34□□□□□ -1.87
H3BM21 MIR8057-201ENST00000620957 69 ntBASIC3.34□□□□□ -1.87
H3BM21 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
H3BM21 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
H3BM21 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
H3BM21 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
H3BM21 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
H3BM21 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
H3BM21 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H3BM21 MIR34C-201ENST00000384831 77 ntBASIC3.33□□□□□ -1.88
H3BM21 AC092185.1-201ENST00000491371 97 ntBASIC3.33□□□□□ -1.88
H3BM21 RPPH1-2P-201ENST00000516688 293 ntBASIC3.33□□□□□ -1.88
H3BM21 RNU6-711P-201ENST00000517255 106 ntBASIC3.33□□□□□ -1.88
H3BM21 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.33□□□□□ -1.88
H3BM21 MIR7112-201ENST00000616126 65 ntBASIC3.33□□□□□ -1.88
H3BM21 MIR6841-201ENST00000637129 72 ntBASIC3.33□□□□□ -1.88
H3BM21 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
H3BM21 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H3BM21 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
H3BM21 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.32□□□□□ -1.88
H3BM21 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H3BM21 AL356274.2-201ENST00000624379 3752 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-34-201ENST00000362441 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-12-201ENST00000362583 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-29-201ENST00000362834 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-9-201ENST00000362912 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-21-201ENST00000362963 81 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-14-201ENST00000363090 81 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-41-201ENST00000363608 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-11-201ENST00000363616 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-5-201ENST00000363633 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-4-201ENST00000363810 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-6-201ENST00000363942 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-42-201ENST00000364273 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-15-201ENST00000364809 81 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-26-201ENST00000365067 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-10-201ENST00000365073 81 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-43-201ENST00000365503 82 ntBASIC3.32□□□□□ -1.88
H3BM21 SNORD115-36-201ENST00000365629 82 ntBASIC3.32□□□□□ -1.88
H3BM21 RNU6-800P-201ENST00000384473 103 ntBASIC3.32□□□□□ -1.88
H3BM21 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H3BM21 RNU6-1307P-201ENST00000391012 103 ntBASIC3.32□□□□□ -1.88
H3BM21 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.32□□□□□ -1.88
H3BM21 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.32□□□□□ -1.88
H3BM21 MIR3152-201ENST00000579801 74 ntBASIC3.32□□□□□ -1.88
H3BM21 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.32□□□□□ -1.88
H3BM21 RNU6-90P-201ENST00000606352 106 ntBASIC3.32□□□□□ -1.88
H3BM21 U6.108-201ENST00000637764 58 ntBASIC3.32□□□□□ -1.88
H3BM21 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H3BM21 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3BM21 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.31□□□□□ -1.88
H3BM21 snoU13.11-201ENST00000459219 104 ntBASIC3.31□□□□□ -1.88
H3BM21 RNU6-687P-201ENST00000516443 89 ntBASIC3.31□□□□□ -1.88
H3BM21 SNORA31.21-201ENST00000517180 77 ntBASIC3.31□□□□□ -1.88
H3BM21 RNU6-586P-201ENST00000517265 104 ntBASIC3.31□□□□□ -1.88
H3BM21 AC007536.1-201ENST00000533382 349 ntBASIC3.31□□□□□ -1.88
H3BM21 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H3BM21 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3BM21 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
H3BM21 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H3BM21 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.31□□□□□ -1.88
H3BM21 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H3BM21 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H3BM21 Y_RNA.168-201ENST00000363740 102 ntBASIC3.3□□□□□ -1.88
H3BM21 MIR206-201ENST00000384872 86 ntBASIC3.3□□□□□ -1.88
H3BM21 MIR128-1-201ENST00000384921 82 ntBASIC3.3□□□□□ -1.88
H3BM21 MIR181B2-201ENST00000385004 89 ntBASIC3.3□□□□□ -1.88
H3BM21 SNORD30.1-201ENST00000391309 70 ntBASIC3.3□□□□□ -1.88
H3BM21 AC087499.7-201ENST00000441958 109 ntBASIC3.3□□□□□ -1.88
H3BM21 SPINT5P-201ENST00000448174 155 ntBASIC3.3□□□□□ -1.88
H3BM21 RNU6-70P-201ENST00000516438 60 ntBASIC3.3□□□□□ -1.88
H3BM21 RNU1-142P-201ENST00000516682 145 ntBASIC3.3□□□□□ -1.88
H3BM21 MIR4513-201ENST00000581077 86 ntBASIC3.3□□□□□ -1.88
H3BM21 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
H3BM21 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
H3BM21 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3BM21 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3BM21 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.29□□□□□ -1.88
H3BM21 MIR30E-201ENST00000362104 92 ntBASIC3.29□□□□□ -1.88
H3BM21 SNORA25.6-201ENST00000364121 118 ntBASIC3.29□□□□□ -1.88
H3BM21 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
H3BM21 RNU4-47P-201ENST00000410876 114 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms