Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 HLA-N-201ENST00000437516 135 ntBASIC3.78□□□□□ -1.8
LHX6Q9UPM6 MIR8066-201ENST00000617280 78 ntBASIC3.78□□□□□ -1.8
LHX6Q9UPM6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
LHX6Q9UPM6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.77□□□□□ -1.81
LHX6Q9UPM6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.77□□□□□ -1.81
LHX6Q9UPM6 MIR3074-201ENST00000384885 81 ntBASIC3.77□□□□□ -1.81
LHX6Q9UPM6 SNORD66.1-201ENST00000391230 76 ntBASIC3.77□□□□□ -1.81
LHX6Q9UPM6 RNU6-587P-201ENST00000391282 106 ntBASIC3.77□□□□□ -1.81
LHX6Q9UPM6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.77□□□□□ -1.81
LHX6Q9UPM6 RNU6-1108P-201ENST00000516308 104 ntBASIC3.77□□□□□ -1.81
LHX6Q9UPM6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LHX6Q9UPM6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX6Q9UPM6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LHX6Q9UPM6 HSBP1P2-201ENST00000299671 229 ntBASIC3.76□□□□□ -1.81
LHX6Q9UPM6 RNA5SP50-201ENST00000363731 107 ntBASIC3.76□□□□□ -1.81
LHX6Q9UPM6 Y_RNA.354-201ENST00000365448 111 ntBASIC3.76□□□□□ -1.81
LHX6Q9UPM6 RNU6-540P-201ENST00000384622 101 ntBASIC3.76□□□□□ -1.81
LHX6Q9UPM6 MIR1179-201ENST00000408703 91 ntBASIC3.76□□□□□ -1.81
LHX6Q9UPM6 SNORA3.3-201ENST00000408712 125 ntBASIC3.76□□□□□ -1.81
LHX6Q9UPM6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.76□□□□□ -1.81
LHX6Q9UPM6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.76□□□□□ -1.81
LHX6Q9UPM6 MIR4484-201ENST00000582855 83 ntBASIC3.76□□□□□ -1.81
LHX6Q9UPM6 MIR8057-201ENST00000620957 69 ntBASIC3.76□□□□□ -1.81
LHX6Q9UPM6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX6Q9UPM6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
LHX6Q9UPM6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
LHX6Q9UPM6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.75□□□□□ -1.81
LHX6Q9UPM6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX6Q9UPM6 RNU1-15P-201ENST00000353977 144 ntBASIC3.75□□□□□ -1.81
LHX6Q9UPM6 RNA5SP126-201ENST00000365092 109 ntBASIC3.75□□□□□ -1.81
LHX6Q9UPM6 MIR136-201ENST00000385207 82 ntBASIC3.75□□□□□ -1.81
LHX6Q9UPM6 HMGN1P33-201ENST00000432945 451 ntBASIC3.75□□□□□ -1.81
LHX6Q9UPM6 AC006011.1-201ENST00000442758 349 ntBASIC3.75□□□□□ -1.81
LHX6Q9UPM6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.75□□□□□ -1.81
LHX6Q9UPM6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX6Q9UPM6 MIR6868-201ENST00000611215 58 ntBASIC3.75□□□□□ -1.81
LHX6Q9UPM6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LHX6Q9UPM6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX6Q9UPM6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX6Q9UPM6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 SNORA60-201ENST00000362396 134 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 RNA5SP97-201ENST00000365006 84 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 MIR452-201ENST00000385020 85 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 MIR516B2-201ENST00000385190 85 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 U8.16-201ENST00000391279 133 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 AC006539.3-201ENST00000454258 129 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 RNU7-85P-201ENST00000458851 63 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 YPEL5P3-201ENST00000547227 352 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 EIF4BP1-201ENST00000554881 351 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 MIR8055-201ENST00000610739 97 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 AC245060.5-201ENST00000610778 3293 ntBASIC3.74□□□□□ -1.81
LHX6Q9UPM6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX6Q9UPM6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LHX6Q9UPM6 AL353746.1-201ENST00000566293 6881 ntBASIC3.73□□□□□ -1.81
LHX6Q9UPM6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LHX6Q9UPM6 RNU6-141P-201ENST00000410499 105 ntBASIC3.73□□□□□ -1.81
LHX6Q9UPM6 RNA5SP120-201ENST00000410900 112 ntBASIC3.73□□□□□ -1.81
LHX6Q9UPM6 AL355297.2-201ENST00000604792 129 ntBASIC3.73□□□□□ -1.81
LHX6Q9UPM6 MIR8065-201ENST00000620577 100 ntBASIC3.73□□□□□ -1.81
LHX6Q9UPM6 AC110079.1-202ENST00000635213 138 ntBASIC3.73□□□□□ -1.81
LHX6Q9UPM6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX6Q9UPM6 MIR7515-201ENST00000637837 67 ntBASIC3.73□□□□□ -1.81
LHX6Q9UPM6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LHX6Q9UPM6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX6Q9UPM6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LHX6Q9UPM6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LHX6Q9UPM6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LHX6Q9UPM6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LHX6Q9UPM6 MIR635-201ENST00000384830 98 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 AC025518.1-201ENST00000479856 347 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 RPS26P15-201ENST00000488067 348 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 AC025445.1-201ENST00000502728 300 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.72□□□□□ -1.81
LHX6Q9UPM6 AC022695.1-201ENST00000522089 237 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 MIR548AR-201ENST00000582191 57 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 MIR5684-201ENST00000585074 65 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 AC006386.2-201ENST00000624491 75 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 AC012005.1-201ENST00000624575 75 ntBASIC3.72□□□□□ -1.81
LHX6Q9UPM6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.72□□□□□ -1.81
LHX6Q9UPM6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.72□□□□□ -1.81
LHX6Q9UPM6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LHX6Q9UPM6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LHX6Q9UPM6 Y_RNA.264-201ENST00000364665 102 ntBASIC3.71□□□□□ -1.82
LHX6Q9UPM6 MIR490-201ENST00000384865 128 ntBASIC3.71□□□□□ -1.82
LHX6Q9UPM6 RNA5SP306-201ENST00000411087 107 ntBASIC3.71□□□□□ -1.82
LHX6Q9UPM6 COTL1P1-201ENST00000422309 375 ntBASIC3.71□□□□□ -1.82
LHX6Q9UPM6 snoU13.16-201ENST00000459350 104 ntBASIC3.71□□□□□ -1.82
LHX6Q9UPM6 AC018868.1-201ENST00000491307 315 ntBASIC3.71□□□□□ -1.82
LHX6Q9UPM6 RNU7-12P-201ENST00000516030 62 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms