Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AL365361.1-201ENST00000566942 3481 ntBASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 RNU6-756P-201ENST00000383997 107 ntBASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 SUMO2P16-201ENST00000519475 264 ntBASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 AC007318.2-201ENST00000620999 243 ntBASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 AL035470.1-201ENST00000622571 220 ntBASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 AC022513.1-201ENST00000624512 117 ntBASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.85□□□□□ -1.95
BHLHE41Q9C0J9 MIR22-201ENST00000362190 85 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 MIR342-201ENST00000362212 99 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 RNU6-766P-201ENST00000362478 107 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 SNORA51.5-201ENST00000384126 131 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 MIR181B1-201ENST00000385240 110 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 RNY4P30-201ENST00000410216 95 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 RNU6-938P-201ENST00000411285 103 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 SNX2P2-201ENST00000424553 323 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 AC069257.2-201ENST00000441819 155 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 RNU7-26P-201ENST00000458980 63 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 RNU7-164P-201ENST00000459221 62 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 RPL39P34-201ENST00000477141 156 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 SNORA72.7-201ENST00000516349 94 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 RNU6-56P-201ENST00000516986 93 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 IGKV3-31-201ENST00000523109 329 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 AC084364.2-201ENST00000546924 395 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 MIR5094-201ENST00000578766 85 ntBASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.84□□□□□ -1.95
BHLHE41Q9C0J9 AC093010.3-201ENST00000570269 15214 ntBASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 Y_RNA.298-201ENST00000364960 107 ntBASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 RN7SL504P-201ENST00000494496 287 ntBASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 MIR5582-201ENST00000579697 68 ntBASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 MIR4325-201ENST00000583049 90 ntBASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 MIR4298-201ENST00000584380 73 ntBASIC2.83□□□□□ -1.96
BHLHE41Q9C0J9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 SNORA38-201ENST00000363946 132 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 Y_RNA.362-201ENST00000365518 110 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 RNU6-1014P-201ENST00000383940 103 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 AL627390.1-201ENST00000396055 340 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 MIR887-201ENST00000401258 79 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 RN7SKP200-201ENST00000410564 320 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 RN7SKP123-201ENST00000410732 291 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 MIR5004-201ENST00000579078 107 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 MIR4513-201ENST00000581077 86 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 AC091932.4-201ENST00000623386 200 ntBASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
BHLHE41Q9C0J9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 SNORA25.6-201ENST00000364121 118 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 RNU6-1113P-201ENST00000384348 107 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 RNU6-424P-201ENST00000384367 105 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 AL034345.1-201ENST00000407768 123 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 UBBP3-201ENST00000445497 241 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 RNA5SP281-201ENST00000516504 135 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 AL162274.2-201ENST00000614406 332 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 AC027279.3-201ENST00000625055 122 ntBASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.81□□□□□ -1.96
BHLHE41Q9C0J9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 Y_RNA.328-201ENST00000365208 113 ntBASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 SNORA54-201ENST00000384281 123 ntBASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 RNU6-950P-201ENST00000384651 107 ntBASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 RNU11-3P-201ENST00000391111 133 ntBASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 RNU7-123P-201ENST00000515911 60 ntBASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 MIR4305-201ENST00000583252 102 ntBASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.8□□□□□ -1.96
BHLHE41Q9C0J9 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 RNA5SP374-201ENST00000362939 125 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 RNU4-16P-201ENST00000364737 141 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 Y_RNA.323-201ENST00000365157 109 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 MIR597-201ENST00000384968 97 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 AL035398.1-201ENST00000430869 322 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 RNU6-830P-201ENST00000516353 107 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 SNORA31.10-201ENST00000516482 106 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 AC107016.2-201ENST00000547968 190 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 AC002984.1-201ENST00000591692 448 ntBASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
BHLHE41Q9C0J9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms