Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.6□□□□□ -1.83
PHOX2BQ99453 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PHOX2BQ99453 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHOX2BQ99453 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PHOX2BQ99453 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.59□□□□□ -1.83
PHOX2BQ99453 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PHOX2BQ99453 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.59□□□□□ -1.83
PHOX2BQ99453 RNU6-283P-201ENST00000364788 107 ntBASIC3.59□□□□□ -1.83
PHOX2BQ99453 SNORA18-201ENST00000384416 132 ntBASIC3.59□□□□□ -1.83
PHOX2BQ99453 AL512326.2-201ENST00000426359 151 ntBASIC3.59□□□□□ -1.83
PHOX2BQ99453 AC109327.2-201ENST00000448339 378 ntBASIC3.59□□□□□ -1.83
PHOX2BQ99453 RNU2-11P-201ENST00000459191 187 ntBASIC3.59□□□□□ -1.83
PHOX2BQ99453 RNU7-113P-201ENST00000459273 62 ntBASIC3.59□□□□□ -1.83
PHOX2BQ99453 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.59□□□□□ -1.83
PHOX2BQ99453 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.59□□□□□ -1.83
PHOX2BQ99453 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.59□□□□□ -1.83
PHOX2BQ99453 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
PHOX2BQ99453 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
PHOX2BQ99453 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.58□□□□□ -1.84
PHOX2BQ99453 RNU4-82P-201ENST00000362443 140 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 SNORD115-2-201ENST00000362842 82 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 SNORD115-20-201ENST00000365099 82 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 Y_RNA.360-201ENST00000365512 102 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHOX2BQ99453 RNU6-1319P-201ENST00000390855 104 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 RNU6-747P-201ENST00000390928 104 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 RNU6-241P-201ENST00000391148 104 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 RNU6-177P-201ENST00000411257 104 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 AC004941.2-201ENST00000427009 228 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.58□□□□□ -1.84
PHOX2BQ99453 RNU7-170P-201ENST00000459303 61 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 RNA5SP208-201ENST00000516156 78 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 MIR3162-201ENST00000581818 82 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 RNVU1-4-201ENST00000612985 164 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PHOX2BQ99453 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PHOX2BQ99453 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
PHOX2BQ99453 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHOX2BQ99453 AC108206.1-201ENST00000570186 4159 ntBASIC3.58□□□□□ -1.84
PHOX2BQ99453 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PHOX2BQ99453 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PHOX2BQ99453 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PHOX2BQ99453 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PHOX2BQ99453 SNORD45B-201ENST00000364617 72 ntBASIC3.57□□□□□ -1.84
PHOX2BQ99453 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.57□□□□□ -1.84
PHOX2BQ99453 MIR452-201ENST00000385020 85 ntBASIC3.57□□□□□ -1.84
PHOX2BQ99453 MIR4425-201ENST00000580572 84 ntBASIC3.57□□□□□ -1.84
PHOX2BQ99453 MIR7851-201ENST00000610611 160 ntBASIC3.57□□□□□ -1.84
PHOX2BQ99453 U4.6-201ENST00000621618 127 ntBASIC3.57□□□□□ -1.84
PHOX2BQ99453 AC064859.1-201ENST00000624741 174 ntBASIC3.57□□□□□ -1.84
PHOX2BQ99453 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.57□□□□□ -1.84
PHOX2BQ99453 CEP170P1-201ENST00000502249 4587 ntBASIC3.57□□□□□ -1.84
PHOX2BQ99453 ICE2P2-201ENST00000483823 2787 ntBASIC3.57□□□□□ -1.84
PHOX2BQ99453 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PHOX2BQ99453 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PHOX2BQ99453 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PHOX2BQ99453 RNU6-573P-201ENST00000383938 106 ntBASIC3.56□□□□□ -1.84
PHOX2BQ99453 POLR2J4-204ENST00000418424 324 ntBASIC3.56□□□□□ -1.84
PHOX2BQ99453 RNA5SP356-201ENST00000515972 94 ntBASIC3.56□□□□□ -1.84
PHOX2BQ99453 RNU6-1018P-201ENST00000516577 106 ntBASIC3.56□□□□□ -1.84
PHOX2BQ99453 MIR5047-201ENST00000579212 100 ntBASIC3.56□□□□□ -1.84
PHOX2BQ99453 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PHOX2BQ99453 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PHOX2BQ99453 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PHOX2BQ99453 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PHOX2BQ99453 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
PHOX2BQ99453 AC092881.1-201ENST00000638218 2733 ntBASIC3.56□□□□□ -1.84
PHOX2BQ99453 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.55□□□□□ -1.84
PHOX2BQ99453 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.55□□□□□ -1.84
PHOX2BQ99453 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PHOX2BQ99453 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PHOX2BQ99453 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PHOX2BQ99453 MIR627-201ENST00000384979 97 ntBASIC3.55□□□□□ -1.84
PHOX2BQ99453 MIR577-201ENST00000385196 96 ntBASIC3.55□□□□□ -1.84
PHOX2BQ99453 SNORD78.1-201ENST00000390866 65 ntBASIC3.55□□□□□ -1.84
PHOX2BQ99453 RNA5SP247-201ENST00000411181 105 ntBASIC3.55□□□□□ -1.84
PHOX2BQ99453 AL135938.1-201ENST00000443141 297 ntBASIC3.55□□□□□ -1.84
PHOX2BQ99453 IGKV2-26-201ENST00000518305 343 ntBASIC3.55□□□□□ -1.84
PHOX2BQ99453 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
PHOX2BQ99453 DNAJC19P9-201ENST00000555084 351 ntBASIC3.55□□□□□ -1.84
PHOX2BQ99453 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.55□□□□□ -1.84
PHOX2BQ99453 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PHOX2BQ99453 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PHOX2BQ99453 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.54□□□□□ -1.84
PHOX2BQ99453 MIR494-201ENST00000349529 81 ntBASIC3.54□□□□□ -1.84
PHOX2BQ99453 Y_RNA.17-201ENST00000362433 111 ntBASIC3.54□□□□□ -1.84
PHOX2BQ99453 RNU6-170P-201ENST00000362832 104 ntBASIC3.54□□□□□ -1.84
PHOX2BQ99453 Y_RNA.377-201ENST00000365644 108 ntBASIC3.54□□□□□ -1.84
PHOX2BQ99453 MIR184-201ENST00000384962 84 ntBASIC3.54□□□□□ -1.84
PHOX2BQ99453 MRPL35P3-201ENST00000421557 364 ntBASIC3.54□□□□□ -1.84
PHOX2BQ99453 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.54□□□□□ -1.84
PHOX2BQ99453 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.54□□□□□ -1.84
PHOX2BQ99453 RNU6-1116P-201ENST00000517269 99 ntBASIC3.54□□□□□ -1.84
PHOX2BQ99453 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.54□□□□□ -1.84
PHOX2BQ99453 IGLL4P-201ENST00000614590 133 ntBASIC3.54□□□□□ -1.84
PHOX2BQ99453 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PHOX2BQ99453 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PHOX2BQ99453 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PHOX2BQ99453 Y_RNA.290-201ENST00000364879 114 ntBASIC3.53□□□□□ -1.84
PHOX2BQ99453 Y_RNA.370-201ENST00000365589 108 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms