Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 FO393413.1-201ENST00000402892 195 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 MIR1265-201ENST00000408444 86 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 AL161932.1-201ENST00000437408 146 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 RNU6-1258P-201ENST00000516911 111 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 GTF3AP2-201ENST00000557014 266 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 MIR4762-201ENST00000585261 75 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 SNORA62.6-201ENST00000606322 83 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 MIR1248-201ENST00000629190 106 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 SNORD14E-201ENST00000364009 85 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 MIR519C-201ENST00000385053 87 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 RNU1-101P-201ENST00000391171 127 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 SNX2P2-201ENST00000424553 323 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 RPS15AP28-201ENST00000435088 386 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 AL161788.1-201ENST00000441805 169 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 AC125388.1-201ENST00000459631 156 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 RNU6-856P-201ENST00000516959 98 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 Y_RNA.788-201ENST00000622394 112 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 MIR7515-201ENST00000637837 67 ntBASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CNTNAP3BQ96NU0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 MIR342-201ENST00000362212 99 ntBASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 Y_RNA.171-201ENST00000363760 102 ntBASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 MIR218-1-201ENST00000384999 110 ntBASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 AC123900.1-201ENST00000420390 96 ntBASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 RPS12P2-201ENST00000439728 269 ntBASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 RNVU1-4-201ENST00000612985 164 ntBASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 AC092881.1-201ENST00000638218 2733 ntBASIC3.35□□□□□ -1.87
CNTNAP3BQ96NU0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 Y_RNA.140-201ENST00000363474 103 ntBASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 MIR95-201ENST00000385072 81 ntBASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 AC060773.1-201ENST00000421698 310 ntBASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 HMGN2P34-201ENST00000437647 269 ntBASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 RNU6-998P-201ENST00000515894 101 ntBASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 SNORA48.11-201ENST00000517015 89 ntBASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 AL591424.2-201ENST00000617023 128 ntBASIC3.34□□□□□ -1.87
CNTNAP3BQ96NU0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CNTNAP3BQ96NU0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.88
CNTNAP3BQ96NU0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 SNORA1B-201ENST00000362535 133 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 U8.5-201ENST00000364528 136 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 Y_RNA.340-201ENST00000365330 92 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 MIR184-201ENST00000384962 84 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 SNORD77B-201ENST00000391112 67 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 RNU6-613P-201ENST00000410412 108 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 RNU7-113P-201ENST00000459273 62 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 AL049830.1-201ENST00000468034 425 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 UBL5P1-201ENST00000507979 193 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 IGKV2-26-201ENST00000518305 343 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 AL356280.1-201ENST00000603614 379 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 SEPT14P17-201ENST00000617978 177 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 U6.108-201ENST00000637764 58 ntBASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
CNTNAP3BQ96NU0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 Z83843.1-201ENST00000604070 3685 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 Y_RNA.332-201ENST00000365271 113 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 Y_RNA.470-201ENST00000384307 117 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 SNORA27-201ENST00000384323 126 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 RNU2-63P-201ENST00000410792 194 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 RPL31P63-201ENST00000422565 375 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 MIR5047-201ENST00000579212 100 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 MIR548AE2-201ENST00000583456 67 ntBASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.32□□□□□ -1.88
CNTNAP3BQ96NU0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms