Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RNA5SP120-201ENST00000410900 112 ntBASIC3.19□□□□□ -1.9
TRIM11Q96F44 RNU6-965P-201ENST00000516721 96 ntBASIC3.19□□□□□ -1.9
TRIM11Q96F44 AP003484.1-201ENST00000530974 250 ntBASIC3.19□□□□□ -1.9
TRIM11Q96F44 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM11Q96F44 MIR5004-201ENST00000579078 107 ntBASIC3.19□□□□□ -1.9
TRIM11Q96F44 AC078899.2-201ENST00000595282 212 ntBASIC3.19□□□□□ -1.9
TRIM11Q96F44 Y_RNA.773-201ENST00000607168 90 ntBASIC3.19□□□□□ -1.9
TRIM11Q96F44 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM11Q96F44 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM11Q96F44 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM11Q96F44 snoU2-30.2-201ENST00000362805 70 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 RNU6-268P-201ENST00000364174 107 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 RNU4-16P-201ENST00000364737 141 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 MIR605-201ENST00000385078 83 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 RN7SKP220-201ENST00000410611 288 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 RNU6-887P-201ENST00000410660 100 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 Y_RNA.620-201ENST00000411009 88 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 AC123900.1-201ENST00000420390 96 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 AC060773.1-201ENST00000421698 310 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 SNRPGP14-201ENST00000435400 219 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 AC087499.4-201ENST00000448505 178 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 PRSS3P4-201ENST00000453323 162 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM11Q96F44 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM11Q96F44 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 AC012314.7-201ENST00000619693 93 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 AC064859.1-201ENST00000624741 174 ntBASIC3.18□□□□□ -1.9
TRIM11Q96F44 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM11Q96F44 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM11Q96F44 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TRIM11Q96F44 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM11Q96F44 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM11Q96F44 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM11Q96F44 RNU1-72P-201ENST00000362976 153 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 Y_RNA.95-201ENST00000363079 95 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 Y_RNA.377-201ENST00000365644 108 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 RNU1-109P-201ENST00000383960 147 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM11Q96F44 AL049830.1-201ENST00000468034 425 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM11Q96F44 MIR4668-201ENST00000582284 70 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 HSPE1P19-201ENST00000603327 295 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 MIR6075-201ENST00000620782 95 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 AC091304.10-201ENST00000641554 121 ntBASIC3.17□□□□□ -1.9
TRIM11Q96F44 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRIM11Q96F44 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM11Q96F44 Y_RNA.332-201ENST00000365271 113 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 RNU6-1083P-201ENST00000384022 107 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 AL627390.1-201ENST00000396055 340 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 RNA5SP144-201ENST00000410846 116 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 AP004217.1-201ENST00000480579 346 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 AC093259.1-201ENST00000509755 300 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 AP002004.2-201ENST00000531656 154 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 AC002984.1-201ENST00000591692 448 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 AC007318.2-201ENST00000620999 243 ntBASIC3.16□□□□□ -1.9
TRIM11Q96F44 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM11Q96F44 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM11Q96F44 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM11Q96F44 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM11Q96F44 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM11Q96F44 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
TRIM11Q96F44 SNORD56.5-201ENST00000364281 72 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 Y_RNA.299-201ENST00000364973 94 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 RN7SKP200-201ENST00000410564 320 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 AL022718.1-201ENST00000412004 84 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 AL035398.1-201ENST00000430869 322 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 AL353813.1-201ENST00000440700 253 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 SEM1P1-201ENST00000506694 209 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 AC004812.1-201ENST00000540773 146 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 MIR4762-201ENST00000585261 75 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 AC095038.3-201ENST00000634439 195 ntBASIC3.15□□□□□ -1.91
TRIM11Q96F44 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM11Q96F44 AC108206.1-201ENST00000570186 4159 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 SNORA1B-201ENST00000362535 133 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 RNU6-743P-201ENST00000364151 106 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 snoU2-30.1-201ENST00000365012 70 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 RNU6-546P-201ENST00000383991 107 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 UBBP3-201ENST00000445497 241 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM11Q96F44 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM11Q96F44 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 MIR4444-1-201ENST00000581696 74 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 MIR4444-2-201ENST00000584390 74 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 AL513534.2-201ENST00000603836 250 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 MIR6798-201ENST00000612887 67 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 AC006160.2-201ENST00000637708 154 ntBASIC3.14□□□□□ -1.91
TRIM11Q96F44 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
TRIM11Q96F44 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TRIM11Q96F44 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM11Q96F44 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms