Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AP004217.1-201ENST00000480579 346 ntBASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 RN7SL297P-201ENST00000483161 293 ntBASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 RNU7-25P-201ENST00000516544 62 ntBASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 AC006441.5-201ENST00000612680 209 ntBASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 RNU6-268P-201ENST00000364174 107 ntBASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 MIR802-201ENST00000390235 94 ntBASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 AC245047.3-201ENST00000429428 127 ntBASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 CALM2P4-201ENST00000430810 426 ntBASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTI1AQ96AJ9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 RNU6-442P-201ENST00000383968 104 ntBASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 HMGN2P35-201ENST00000412164 270 ntBASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 AC007064.1-201ENST00000412238 351 ntBASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 AC008413.1-201ENST00000511864 177 ntBASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
VTI1AQ96AJ9 AC108206.1-201ENST00000570186 4159 ntBASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 RNU6-1084P-201ENST00000362498 107 ntBASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 SNORD14E-201ENST00000364009 85 ntBASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 Y_RNA.366-201ENST00000365540 102 ntBASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 RNU6-880P-201ENST00000384526 107 ntBASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 SNORD45.4-201ENST00000516629 73 ntBASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 MIR4446-201ENST00000578505 67 ntBASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VTI1AQ96AJ9 snoU2-30.1-201ENST00000365012 70 ntBASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 Y_RNA.547-201ENST00000384654 119 ntBASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 RNU6-113P-201ENST00000516653 101 ntBASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 AC026271.5-201ENST00000577873 130 ntBASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 AC134878.1-201ENST00000619901 243 ntBASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 AP006437.1-201ENST00000641440 3685 ntBASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 ICE2P2-201ENST00000483823 2787 ntBASIC3.16□□□□□ -1.9
VTI1AQ96AJ9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.15□□□□□ -1.9
VTI1AQ96AJ9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VTI1AQ96AJ9 RNU6-859P-201ENST00000362728 107 ntBASIC3.15□□□□□ -1.91
VTI1AQ96AJ9 Y_RNA.528-201ENST00000384575 108 ntBASIC3.15□□□□□ -1.91
VTI1AQ96AJ9 RNA5SP482-201ENST00000391269 118 ntBASIC3.15□□□□□ -1.91
VTI1AQ96AJ9 AL138827.1-201ENST00000402666 306 ntBASIC3.15□□□□□ -1.91
VTI1AQ96AJ9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.15□□□□□ -1.91
VTI1AQ96AJ9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.15□□□□□ -1.91
VTI1AQ96AJ9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.15□□□□□ -1.91
VTI1AQ96AJ9 AC008555.8-201ENST00000623602 2168 ntBASIC3.15□□□□□ -1.91
VTI1AQ96AJ9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 RNU1-58P-201ENST00000362413 163 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 RNA5SP432-201ENST00000362480 116 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 Y_RNA.37-201ENST00000362606 108 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 RNU1-112P-201ENST00000364401 164 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 Y_RNA.265-201ENST00000364677 108 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 RNU1-52P-201ENST00000384190 164 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 SNORD88.1-201ENST00000408684 91 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 BX510359.4-201ENST00000423750 193 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 SNORD36C-201ENST00000516733 66 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 RNA5SP137-201ENST00000516833 135 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 MIR4658-201ENST00000584344 65 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 AL137067.1-201ENST00000615933 120 ntBASIC3.14□□□□□ -1.91
VTI1AQ96AJ9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 SNORD115-28-201ENST00000363931 81 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 SNORA2.2-201ENST00000365473 135 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 RNU6-1189P-201ENST00000383958 107 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 Y_RNA.410-201ENST00000383992 113 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 RNU1-148P-201ENST00000384472 162 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 SNORA80E-201ENST00000384744 137 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 RNU6-938P-201ENST00000411285 103 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 RNU6-240P-201ENST00000516098 97 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 AC004486.1-201ENST00000546846 233 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 MIR4679-2-201ENST00000578358 77 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 MIR8054-201ENST00000620877 86 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 MIR203B-201ENST00000636080 86 ntBASIC3.13□□□□□ -1.91
VTI1AQ96AJ9 RNU6-440P-201ENST00000390882 105 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 STAG3L5P-204ENST00000443759 179 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 AL513328.1-201ENST00000446460 224 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 RNU6-1116P-201ENST00000517269 99 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 AC084364.2-201ENST00000546924 395 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 AC005786.1-201ENST00000588553 154 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
VTI1AQ96AJ9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 RNA5SP68-201ENST00000363885 119 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 Y_RNA.336-201ENST00000365307 109 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms