Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 U8.16-201ENST00000391279 133 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 MIR1236-201ENST00000408340 102 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 AC022695.1-201ENST00000522089 237 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 MIR4474-201ENST00000579189 78 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 MIR4429-201ENST00000580105 73 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 AC243994.1-201ENST00000618627 109 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA68.1-201ENST00000364537 132 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA73.2-201ENST00000364946 201 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA24-201ENST00000384096 131 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 MIR452-201ENST00000385020 85 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 RNU6-913P-201ENST00000390913 95 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 RNA5SP424-201ENST00000390988 115 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 AL034345.1-201ENST00000407768 123 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 HMGN2P7-201ENST00000456186 273 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA25.13-201ENST00000516395 103 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 RNU7-153P-201ENST00000516455 62 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 MIR3944-201ENST00000581277 108 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 AC008739.3-201ENST00000603262 127 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA62.6-201ENST00000606322 83 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 AC012676.2-201ENST00000619258 186 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 MIR6075-201ENST00000620782 95 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 Y_RNA.57-201ENST00000362806 113 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 SNORA3.3-201ENST00000408712 125 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 AC125388.1-201ENST00000459631 156 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 AC104619.4-201ENST00000510773 249 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 RN7SKP83-201ENST00000516512 178 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 SNORD59.2-201ENST00000516873 68 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 RNU7-35P-201ENST00000517174 62 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 CYCSP30-201ENST00000546447 172 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 AC007336.1-201ENST00000576365 3828 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 AC091152.2-201ENST00000591628 2569 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 RNU6-23P-201ENST00000363283 107 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 RNU6-380P-201ENST00000410207 107 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 RNU6-1086P-201ENST00000410930 100 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 RNA5SP208-201ENST00000516156 78 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 SNORA70.19-201ENST00000516717 90 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCD2Q8WV60 Y_RNA.173-201ENST00000363776 113 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1067P-201ENST00000384752 107 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 SNORA26.7-201ENST00000391288 122 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 MIR1262-201ENST00000408276 93 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-447P-201ENST00000410293 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1118P-201ENST00000410382 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1076P-201ENST00000410397 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-355P-201ENST00000410427 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-791P-201ENST00000410467 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-705P-201ENST00000410601 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1100P-201ENST00000410691 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-860P-201ENST00000410860 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1217P-201ENST00000411276 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-785P-201ENST00000411324 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RN7SL330P-201ENST00000469709 307 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 SNORD67.1-201ENST00000516618 108 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNA5SP168-201ENST00000516642 112 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCD2Q8WV60 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCD2Q8WV60 U6.90-201ENST00000614007 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 U6.70-201ENST00000620287 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCD2Q8WV60 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTCD2Q8WV60 RNA5SP171-201ENST00000391071 115 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 RNU6ATAC-201ENST00000408749 126 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 snoU13.22-201ENST00000459428 104 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 SNORA31.10-201ENST00000516482 106 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 RNU6-539P-201ENST00000516665 103 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 AC105081.1-201ENST00000617727 106 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCD2Q8WV60 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCD2Q8WV60 Y_RNA.98-201ENST00000363109 102 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 RNU6-478P-201ENST00000363904 110 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 Y_RNA.354-201ENST00000365448 111 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 CD24P4-201ENST00000382840 243 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PTCD2Q8WV60 HMGN1P33-201ENST00000432945 451 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 AL450471.1-201ENST00000447509 127 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms