Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.64□□□□□ -1.99
SH3RF3Q8TEJ3 AC112771.1-201ENST00000463581 102 ntBASIC2.64□□□□□ -1.99
SH3RF3Q8TEJ3 AC027419.1-201ENST00000522976 328 ntBASIC2.64□□□□□ -1.99
SH3RF3Q8TEJ3 AC079598.5-201ENST00000547460 117 ntBASIC2.64□□□□□ -1.99
SH3RF3Q8TEJ3 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
SH3RF3Q8TEJ3 AL137847.3-201ENST00000611521 109 ntBASIC2.64□□□□□ -1.99
SH3RF3Q8TEJ3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.64□□□□□ -1.99
SH3RF3Q8TEJ3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 RNA5SP125-201ENST00000364843 120 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 RNA5SP173-201ENST00000364857 136 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 SNORA51.5-201ENST00000384126 131 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-975P-201ENST00000384296 105 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 MIR504-201ENST00000385065 83 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 RNA5SP127-201ENST00000411051 133 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 AC016909.1-201ENST00000415916 166 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 AF228730.3-201ENST00000436691 102 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 ATP5EP1-201ENST00000510257 156 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-365P-201ENST00000517113 106 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 AL035470.1-201ENST00000622571 220 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 MIR1245B-201ENST00000636115 69 ntBASIC2.63□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 SNORA1-201ENST00000384107 130 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 MIR1289-2-201ENST00000408360 111 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 RNU2-63P-201ENST00000410792 194 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 AC016717.1-201ENST00000448918 286 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 SNORA18.4-201ENST00000516440 124 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 RNU7-149P-201ENST00000516739 59 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 AC025647.1-201ENST00000517879 253 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-94P-201ENST00000607728 107 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SH3RF3Q8TEJ3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 MIR6073-201ENST00000352083 89 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-1014P-201ENST00000383940 103 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 MIR570-201ENST00000384917 97 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 SNORA11.4-201ENST00000408823 129 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-592P-201ENST00000411333 103 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 AC003685.2-201ENST00000422795 395 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 RPS4XP11-201ENST00000446897 772 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 MIR449C-201ENST00000516047 92 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 Pinc.1-201ENST00000616452 154 ntBASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SH3RF3Q8TEJ3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 SNORD114-1-201ENST00000362705 72 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 Y_RNA.323-201ENST00000365157 109 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-573P-201ENST00000383938 106 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 RNY1P7-201ENST00000384743 110 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-440P-201ENST00000390882 105 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 MIR300-201ENST00000401138 83 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 RNU6-57P-201ENST00000411348 103 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 CYP2C59P-201ENST00000457790 269 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 RNU7-14P-201ENST00000459331 62 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 RNA5SP200-201ENST00000516360 103 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 MIR4658-201ENST00000584344 65 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 MIR5739-201ENST00000619803 80 ntBASIC2.6□□□□□ -1.99
SH3RF3Q8TEJ3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 EIF4EP4-201ENST00000424916 578 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 MTATP6P21-201ENST00000440681 189 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 CKS1BP2-201ENST00000497342 240 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 SCARNA15-202ENST00000516881 127 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 MIR3129-201ENST00000581095 76 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 U4atac.1-201ENST00000618345 95 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 AC006435.5-201ENST00000624486 112 ntBASIC2.59□□□□□ -1.99
SH3RF3Q8TEJ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.59□□□□□ -2
SH3RF3Q8TEJ3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 RNU1-22P-201ENST00000363334 158 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 RNU4-13P-201ENST00000364019 141 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 Y_RNA.366-201ENST00000365540 102 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 SNORA26-201ENST00000391286 122 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 MIR1302-5-201ENST00000408164 150 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 RNA5SP136-201ENST00000410906 107 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 RPL39P34-201ENST00000477141 156 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 COX6CP6-201ENST00000490840 228 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 OR9P1P-201ENST00000496431 281 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 RNU6-109P-201ENST00000516364 107 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 SNORA40.13-201ENST00000516379 120 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 RNU6-184P-201ENST00000516514 107 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 MIR2681-201ENST00000581814 105 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms