Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 ICE2P2-201ENST00000483823 2787 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 RNU4-84P-201ENST00000364200 139 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 RNY3P5-201ENST00000384127 102 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 RNU6-440P-201ENST00000390882 105 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 RNU2-7P-201ENST00000410794 178 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 HSPE1P9-201ENST00000440046 311 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 STAG3L5P-204ENST00000443759 179 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 NDUFA4P2-201ENST00000489989 244 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 RPS29P11-201ENST00000496507 171 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 SNORA31.11-201ENST00000516528 139 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 RNU1-104P-201ENST00000517280 175 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 MIR8081-201ENST00000611533 95 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 AC245884.12-201ENST00000615364 59 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 MIR8054-201ENST00000620877 86 ntBASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SFTPA1Q8IWL2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 RNA5SP393-201ENST00000363423 117 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 SNORA4.2-201ENST00000365313 147 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 AC019129.1-201ENST00000403786 261 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 SNORA31.10-201ENST00000516482 106 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 RNU7-149P-201ENST00000516739 59 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 SUB1P4-201ENST00000566062 339 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 MIR3658-201ENST00000636291 56 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 FO624990.1-201ENST00000636373 85 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.96□□□□□ -2.1
SFTPA1Q8IWL2 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
SFTPA1Q8IWL2 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
SFTPA1Q8IWL2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.95□□□□□ -2.1
SFTPA1Q8IWL2 AC069257.2-201ENST00000441819 155 ntBASIC1.95□□□□□ -2.1
SFTPA1Q8IWL2 SNORD77.4-201ENST00000516158 81 ntBASIC1.95□□□□□ -2.1
SFTPA1Q8IWL2 RNA5SP437-201ENST00000517249 129 ntBASIC1.95□□□□□ -2.1
SFTPA1Q8IWL2 Pinc.1-201ENST00000616452 154 ntBASIC1.95□□□□□ -2.1
SFTPA1Q8IWL2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SFTPA1Q8IWL2 AL157777.2-201ENST00000258070 137 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-112P-201ENST00000363599 104 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 SNORA63D-201ENST00000364359 132 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 SNORA67.1-201ENST00000364749 141 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-643P-201ENST00000384018 107 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 Y_RNA.432-201ENST00000384087 111 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 MIR520A-201ENST00000384862 85 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 MIR522-201ENST00000385071 87 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 MIR524-201ENST00000385242 87 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-239P-201ENST00000390990 99 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-131P-201ENST00000391144 107 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 OR9P1P-201ENST00000496431 281 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 AC005840.1-201ENST00000498412 377 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 AC107027.2-201ENST00000512197 115 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 RNA5SP272-201ENST00000516095 111 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-1299P-201ENST00000516316 100 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 RNU2-19P-201ENST00000517288 84 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 AP000942.3-201ENST00000603702 160 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 U1.36-201ENST00000620684 176 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 U2.22-201ENST00000636441 106 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 AC005336.3-201ENST00000623833 2679 ntBASIC1.94□□□□□ -2.1
SFTPA1Q8IWL2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 MIRLET7G-201ENST00000362280 84 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-449P-201ENST00000383914 107 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-484P-201ENST00000384016 107 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 SNORA19-201ENST00000384737 128 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 SNORD72-201ENST00000390994 80 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 RNA5SP482-201ENST00000391269 118 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 SNORA79-201ENST00000408376 140 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 AL021397.1-201ENST00000451806 248 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 AC055731.1-201ENST00000474387 401 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 SNORD116-25-201ENST00000516517 92 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 MIR3910-1-201ENST00000580936 111 ntBASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SFTPA1Q8IWL2 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-1084P-201ENST00000362498 107 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 Y_RNA.91-201ENST00000363042 107 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-151P-201ENST00000364158 107 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 RNY1P5-201ENST00000383890 115 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-296P-201ENST00000384608 107 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 Y_RNA.580-201ENST00000391004 95 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 RNU2-70P-201ENST00000410718 179 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 RNA5SP57-201ENST00000459463 123 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 MRPS17P9-201ENST00000511924 393 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-406P-201ENST00000516470 107 ntBASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SFTPA1Q8IWL2 Y_RNA.486-201ENST00000384398 107 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 Y_RNA.521-201ENST00000384560 114 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms