Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
VRK3Q8IV63 MIR561-201ENST00000385216 97 ntBASIC2.26□□□□□ -2.05
VRK3Q8IV63 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
VRK3Q8IV63 MIR3129-201ENST00000581095 76 ntBASIC2.26□□□□□ -2.05
VRK3Q8IV63 AC087685.1-201ENST00000587507 141 ntBASIC2.26□□□□□ -2.05
VRK3Q8IV63 AC025166.1-201ENST00000612411 163 ntBASIC2.26□□□□□ -2.05
VRK3Q8IV63 AL359075.3-201ENST00000613288 217 ntBASIC2.26□□□□□ -2.05
VRK3Q8IV63 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.26□□□□□ -2.05
VRK3Q8IV63 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VRK3Q8IV63 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VRK3Q8IV63 RNU6-1255P-201ENST00000363434 112 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 RNA5SP126-201ENST00000365092 109 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 SNORD72-201ENST00000390994 80 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 AL117342.1-201ENST00000404861 406 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 AC003685.2-201ENST00000422795 395 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 SNRPGP10-201ENST00000432323 225 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.25□□□□□ -2.05
VRK3Q8IV63 RNU1-131P-201ENST00000458943 161 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 Y_RNA.649-201ENST00000459077 103 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 RNU6-113P-201ENST00000516653 101 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 RNA5SP82-201ENST00000516707 92 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 SCARNA15-202ENST00000516881 127 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 MIR3124-201ENST00000582636 67 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 MIR5007-201ENST00000583098 95 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 MIR6079-201ENST00000635807 62 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 MTND5P18-201ENST00000445624 1801 ntBASIC2.25□□□□□ -2.05
VRK3Q8IV63 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
VRK3Q8IV63 RNU6-880P-201ENST00000384526 107 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 MIR548A2-201ENST00000384956 97 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VRK3Q8IV63 SNORD77.3-201ENST00000391113 65 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 RNA5SP467-201ENST00000391274 118 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 RNU6-1186P-201ENST00000410429 97 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 RNU2-63P-201ENST00000410792 194 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 SRIP3-201ENST00000413200 219 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.24□□□□□ -2.05
VRK3Q8IV63 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 AL121890.5-201ENST00000620848 304 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
VRK3Q8IV63 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.24□□□□□ -2.05
VRK3Q8IV63 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.24□□□□□ -2.05
VRK3Q8IV63 Y_RNA.242-201ENST00000364473 110 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 MIR627-201ENST00000384979 97 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 SNORA12.1-201ENST00000390873 148 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 RNU6-220P-201ENST00000390919 107 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 RNA5SP89-201ENST00000410300 108 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 FTH1P12-201ENST00000432137 551 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 CKS1BP2-201ENST00000497342 240 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 Y_RNA.666-201ENST00000516187 112 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 RNU6-168P-201ENST00000516189 101 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 RNU6-1291P-201ENST00000516591 104 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 RNU6-667P-201ENST00000517186 102 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 AL355297.2-201ENST00000604792 129 ntBASIC2.23□□□□□ -2.05
VRK3Q8IV63 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.23□□□□□ -2.05
VRK3Q8IV63 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
VRK3Q8IV63 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VRK3Q8IV63 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VRK3Q8IV63 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.22□□□□□ -2.05
VRK3Q8IV63 SNORD114-6-201ENST00000364393 72 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 MIR522-201ENST00000385071 87 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 Y_RNA.621-201ENST00000411065 96 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 SNRPGP13-201ENST00000442212 177 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 AC233266.1-201ENST00000454518 96 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 RNU6-1041P-201ENST00000516254 102 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 AC242852.1-201ENST00000612151 96 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 AC244015.1-201ENST00000622301 99 ntBASIC2.22□□□□□ -2.05
VRK3Q8IV63 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VRK3Q8IV63 Y_RNA.99-201ENST00000363138 105 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 SNORA67.1-201ENST00000364749 141 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 Y_RNA.281-201ENST00000364774 94 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 SNORA25B-201ENST00000365507 128 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 MIR518F-201ENST00000384973 87 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 MIR548A1-201ENST00000385041 97 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 RNU4-53P-201ENST00000410828 140 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 RNA5SP136-201ENST00000410906 107 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 EDDM3CP-201ENST00000415977 425 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.21□□□□□ -2.06
VRK3Q8IV63 RNU6-693P-201ENST00000516134 107 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 RNU1-142P-201ENST00000516682 145 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 RNU6-1149P-201ENST00000516810 97 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 RNU6-1270P-201ENST00000517128 108 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 AC091544.4-201ENST00000555268 342 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 MIR4762-201ENST00000585261 75 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 AL591926.4-201ENST00000616895 298 ntBASIC2.21□□□□□ -2.06
VRK3Q8IV63 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VRK3Q8IV63 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
VRK3Q8IV63 MIR126-201ENST00000362291 85 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 RPS26P48-201ENST00000491713 339 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 AC008413.1-201ENST00000511864 177 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 Y_RNA.694-201ENST00000516677 117 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 AC024995.1-201ENST00000523014 93 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 AP002004.2-201ENST00000531656 154 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.2□□□□□ -2.06
VRK3Q8IV63 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms