Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 RNY3P5-201ENST00000384127 102 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 MIR562-201ENST00000384894 95 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 RNA5SP501-201ENST00000410990 112 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 RNA5SP450-201ENST00000411206 102 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 RNU7-94P-201ENST00000459576 63 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 NDUFA4P2-201ENST00000489989 244 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 AC005840.1-201ENST00000498412 377 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 RNU7-200P-201ENST00000516105 62 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 MIR2681-201ENST00000581814 105 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 AC069114.2-201ENST00000604699 304 ntBASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
C9orf139Q6ZV77 ZNF702P-202ENST00000434269 1966 ntBASIC1.65□□□□□ -2.14
C9orf139Q6ZV77 RNU6-1019P-201ENST00000364424 107 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 RNU6-728P-201ENST00000365375 104 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.357-201ENST00000365487 109 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 RNU6-484P-201ENST00000384016 107 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 RNU6-187P-201ENST00000384139 106 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 SNORA48.1-201ENST00000390879 135 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 RNU6-239P-201ENST00000390990 99 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.580-201ENST00000391004 95 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 HMGN1P7-201ENST00000491722 313 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 RNU6-346P-201ENST00000516288 111 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 AL358944.1-201ENST00000528537 144 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 AP002004.2-201ENST00000531656 154 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 AL096840.1-201ENST00000603287 93 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 uc_338.4-201ENST00000616635 176 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 AL591926.4-201ENST00000616895 298 ntBASIC1.65□□□□□ -2.15
C9orf139Q6ZV77 SNORD116-18-201ENST00000383961 92 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 RNU6-643P-201ENST00000384018 107 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 SNORA12.1-201ENST00000390873 148 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 RNU4-43P-201ENST00000410628 137 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 AC245047.3-201ENST00000429428 127 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 SNRPGP10-201ENST00000432323 225 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 RPL23AP6-201ENST00000446637 472 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 AL049830.1-201ENST00000468034 425 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 AC090255.1-201ENST00000495779 349 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 SNORD77.4-201ENST00000516158 81 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 SNORA31.10-201ENST00000516482 106 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 RNU7-121P-201ENST00000516604 62 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 JPX_2.1-201ENST00000614161 69 ntBASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
C9orf139Q6ZV77 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 AC006461.1-201ENST00000412637 326 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 HMGN2P38-201ENST00000423806 265 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 HMGN2P23-201ENST00000456759 269 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 AC025033.1-201ENST00000463883 194 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 RNU2-56P-201ENST00000516826 190 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.703-201ENST00000516846 111 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 RNU6-548P-201ENST00000517083 115 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 SUB1P4-201ENST00000566062 339 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 AL773524.1-201ENST00000614065 229 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 MIR8054-201ENST00000620877 86 ntBASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
C9orf139Q6ZV77 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 SNORA63D-201ENST00000364359 132 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 RNY1P5-201ENST00000383890 115 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 RNU6-449P-201ENST00000383914 107 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 MIR583-201ENST00000384846 75 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 MIR522-201ENST00000385071 87 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 RNU6-440P-201ENST00000390882 105 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 RNU2-55P-201ENST00000411146 174 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 AC107027.2-201ENST00000512197 115 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 RNU7-149P-201ENST00000516739 59 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 RNU1-40P-201ENST00000516816 164 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 RNU1-97P-201ENST00000516872 164 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 MIR5002-201ENST00000584713 97 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 MIR3658-201ENST00000636291 56 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.62□□□□□ -2.15
C9orf139Q6ZV77 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 SNORA4.2-201ENST00000365313 147 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.432-201ENST00000384087 111 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 RNU4-52P-201ENST00000384209 138 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 MLLT10P1-201ENST00000418346 262 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 AC244636.1-201ENST00000421152 228 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 HSPE1P9-201ENST00000440046 311 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 AC023449.1-201ENST00000454464 154 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 RNA5SP437-201ENST00000517249 129 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 Pinc.1-201ENST00000616452 154 ntBASIC1.61□□□□□ -2.15
C9orf139Q6ZV77 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.91-201ENST00000363042 107 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 SNORD68-201ENST00000363214 84 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 RNU6-112P-201ENST00000363599 104 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms