Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR203B-201ENST00000636080 86 ntBASIC3.73□□□□□ -1.81
RC3H1Q5TC82 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.73□□□□□ -1.81
RC3H1Q5TC82 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
RC3H1Q5TC82 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RC3H1Q5TC82 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.73□□□□□ -1.81
RC3H1Q5TC82 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RC3H1Q5TC82 RNU6-268P-201ENST00000364174 107 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 RNU4-67P-201ENST00000364569 141 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 Y_RNA.426-201ENST00000384068 113 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 MIR184-201ENST00000384962 84 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 MIR605-201ENST00000385078 83 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 RNU6-788P-201ENST00000390967 104 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 RNA5SP252-201ENST00000391131 119 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 SNRPGP14-201ENST00000435400 219 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 SNORD109B-201ENST00000458961 67 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 SNORD109A-201ENST00000459128 67 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 AP003484.1-201ENST00000530974 250 ntBASIC3.72□□□□□ -1.81
RC3H1Q5TC82 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RC3H1Q5TC82 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.71□□□□□ -1.81
RC3H1Q5TC82 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 SNORD14E-201ENST00000364009 85 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 SNORA9.2-201ENST00000365361 133 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 AC123900.1-201ENST00000420390 96 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 TRIAP1P1-201ENST00000427062 225 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 AC244505.4-201ENST00000434905 287 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 SSXP5-201ENST00000443473 287 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 AL049830.1-201ENST00000468034 425 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.71□□□□□ -1.82
RC3H1Q5TC82 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.71□□□□□ -1.82
RC3H1Q5TC82 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
RC3H1Q5TC82 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.71□□□□□ -1.82
RC3H1Q5TC82 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RC3H1Q5TC82 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RC3H1Q5TC82 SNORD45B-201ENST00000364617 72 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 RNU4-16P-201ENST00000364737 141 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 MIR9-1-201ENST00000385198 89 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 RPS23P4-201ENST00000487908 423 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.7□□□□□ -1.82
RC3H1Q5TC82 AC093259.1-201ENST00000509755 300 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.7□□□□□ -1.82
RC3H1Q5TC82 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.7□□□□□ -1.82
RC3H1Q5TC82 AC002984.1-201ENST00000591692 448 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 AC064859.1-201ENST00000624741 174 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 AC091304.10-201ENST00000641554 121 ntBASIC3.7□□□□□ -1.82
RC3H1Q5TC82 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.7□□□□□ -1.82
RC3H1Q5TC82 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RC3H1Q5TC82 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.7□□□□□ -1.82
RC3H1Q5TC82 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RC3H1Q5TC82 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RC3H1Q5TC82 snoU2-30.2-201ENST00000362805 70 ntBASIC3.69□□□□□ -1.82
RC3H1Q5TC82 RNU6-743P-201ENST00000364151 106 ntBASIC3.69□□□□□ -1.82
RC3H1Q5TC82 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.69□□□□□ -1.82
RC3H1Q5TC82 AC087499.4-201ENST00000448505 178 ntBASIC3.69□□□□□ -1.82
RC3H1Q5TC82 RNU6-1018P-201ENST00000516577 106 ntBASIC3.69□□□□□ -1.82
RC3H1Q5TC82 Y_RNA.705-201ENST00000516862 110 ntBASIC3.69□□□□□ -1.82
RC3H1Q5TC82 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.69□□□□□ -1.82
RC3H1Q5TC82 MIR4425-201ENST00000580572 84 ntBASIC3.69□□□□□ -1.82
RC3H1Q5TC82 AC078899.2-201ENST00000595282 212 ntBASIC3.69□□□□□ -1.82
RC3H1Q5TC82 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
RC3H1Q5TC82 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RC3H1Q5TC82 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RC3H1Q5TC82 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RC3H1Q5TC82 SNORA1B-201ENST00000362535 133 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 Y_RNA.332-201ENST00000365271 113 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 MIR767-201ENST00000390228 109 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 RNA5SP467-201ENST00000391274 118 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 MIR1261-201ENST00000408659 82 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 RNU6-887P-201ENST00000410660 100 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 RNA5SP144-201ENST00000410846 116 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 Y_RNA.620-201ENST00000411009 88 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 AL353813.1-201ENST00000440700 253 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 AC092185.1-201ENST00000491371 97 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 RNU1-143P-201ENST00000516296 146 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 AC004812.1-201ENST00000540773 146 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 AL513534.2-201ENST00000603836 250 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 U1.23-201ENST00000610293 146 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 RNU1-68P-201ENST00000615382 146 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 U1.39-201ENST00000621562 146 ntBASIC3.68□□□□□ -1.82
RC3H1Q5TC82 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RC3H1Q5TC82 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RC3H1Q5TC82 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RC3H1Q5TC82 MIR340-201ENST00000362125 95 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 RNU6-1084P-201ENST00000362498 107 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 Y_RNA.95-201ENST00000363079 95 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 RNU1-105P-201ENST00000363470 161 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 RNA5SP139-201ENST00000364340 117 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 RNU6-546P-201ENST00000383991 107 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 RNU6-1083P-201ENST00000384022 107 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 AL627390.1-201ENST00000396055 340 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 RN7SKP200-201ENST00000410564 320 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 AL512326.2-201ENST00000426359 151 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.67□□□□□ -1.82
RC3H1Q5TC82 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 AP002004.2-201ENST00000531656 154 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 MIR4668-201ENST00000582284 70 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 MIR4762-201ENST00000585261 75 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.67□□□□□ -1.82
RC3H1Q5TC82 AC095038.3-201ENST00000634439 195 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms