Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RPS27P21-201ENST00000486977 252 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 AL163195.1-201ENST00000496941 348 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 SNORA25.12-201ENST00000516202 82 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 RNU7-99P-201ENST00000516271 62 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 RNU1-142P-201ENST00000516682 145 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 MIR548X2-201ENST00000579776 100 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 MIR5688-201ENST00000580619 83 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 RNU4-13P-201ENST00000364019 141 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 RNU6-959P-201ENST00000384671 107 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 SNORA48.1-201ENST00000390879 135 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 MTATP6P29-201ENST00000415057 132 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 CYCSP49-201ENST00000420810 319 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 AC245047.4-201ENST00000433189 144 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 AL606517.2-201ENST00000442855 241 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 RNU6-437P-201ENST00000459408 95 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 RPL36AP21-201ENST00000490372 323 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 MIR548AI-201ENST00000579940 88 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 AL929325.1-201ENST00000603096 117 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 AP000942.3-201ENST00000603702 160 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 AC069114.2-201ENST00000604699 304 ntBASIC2.22□□□□□ -2.05
SLC44A4Q53GD3 AL359851.1-201ENST00000569460 4997 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 RNU6-728P-201ENST00000365375 104 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 RNU6-643P-201ENST00000384018 107 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 RNU6-1117P-201ENST00000384525 104 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 SNRPGP8-201ENST00000454064 226 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 RNU7-116P-201ENST00000516940 62 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 AC084364.2-201ENST00000546924 395 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
SLC44A4Q53GD3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 RNU4-41P-201ENST00000364426 143 ntBASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 RNA5SP109-201ENST00000391010 116 ntBASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 RNU2-40P-201ENST00000410833 196 ntBASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 AC010332.2-201ENST00000613083 1904 ntBASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLC44A4Q53GD3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RNU6-199P-201ENST00000362954 107 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RNU1-17P-201ENST00000363022 152 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RNY1P11-201ENST00000363759 113 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 SNORD45.3-201ENST00000363836 72 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RNU6-22P-201ENST00000384355 107 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RNU6-768P-201ENST00000384683 107 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 MIR515-2-201ENST00000384883 83 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 MIR515-1-201ENST00000384884 83 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 SNORD37.2-201ENST00000391075 66 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 MIR513C-201ENST00000401352 84 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RPS4XP11-201ENST00000446897 772 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RPS26P45-201ENST00000471748 340 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RNA5SP364-201ENST00000516938 78 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 AL049861.1-201ENST00000603130 150 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 AL365222.1-201ENST00000614661 98 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SLC44A4Q53GD3 RNU6-674P-201ENST00000363831 107 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 RNA5SP138-201ENST00000365098 114 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 RNU6-1081P-201ENST00000384537 107 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 RPL30P13-201ENST00000418873 348 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 MTND4LP9-201ENST00000427694 174 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 AC024995.1-201ENST00000523014 93 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 AC112693.2-201ENST00000556538 232 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 SUB1P4-201ENST00000566062 339 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 AC022217.4-201ENST00000604389 163 ntBASIC2.18□□□□□ -2.06
SLC44A4Q53GD3 AC018630.2-201ENST00000534866 2403 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 SNORA72-201ENST00000384339 132 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 RNU6-588P-201ENST00000410281 105 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 RNU6-971P-201ENST00000516920 106 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 MIR6845-201ENST00000613182 61 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 MIR6079-201ENST00000635807 62 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 MIR6844-201ENST00000637122 62 ntBASIC2.17□□□□□ -2.06
SLC44A4Q53GD3 RNU6-112P-201ENST00000363599 104 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms