Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MT-TI-201ENST00000387365 69 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 SRIP3-201ENST00000413200 219 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 AC099677.2-201ENST00000436385 175 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 RN7SL636P-201ENST00000497504 294 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.91□□□□□ -1.94
SOX4Q06945 RNU6-970P-201ENST00000516312 107 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 RNU6-830P-201ENST00000516353 107 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 AC024995.1-201ENST00000523014 93 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 AC068339.1-201ENST00000526965 141 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SOX4Q06945 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SOX4Q06945 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SOX4Q06945 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SOX4Q06945 MIR26A1-201ENST00000362205 77 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 Y_RNA.99-201ENST00000363138 105 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 Y_RNA.298-201ENST00000364960 107 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 RNU6-220P-201ENST00000390919 107 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 U8.17-201ENST00000391292 132 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 SNRPGP14-201ENST00000435400 219 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 RNU1-131P-201ENST00000458943 161 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 RNU6-109P-201ENST00000516364 107 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 RNU6-184P-201ENST00000516514 107 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 SNORD36C-201ENST00000516733 66 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 SUMO2P16-201ENST00000519475 264 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX4Q06945 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX4Q06945 AC093010.3-201ENST00000570269 15214 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
SOX4Q06945 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
SOX4Q06945 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX4Q06945 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX4Q06945 U8.5-201ENST00000364528 136 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 RNU1-133P-201ENST00000364867 167 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 snoU2-30.1-201ENST00000365012 70 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 SNORA25B-201ENST00000365507 128 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 RNY1P6-201ENST00000384193 109 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 Y_RNA.558-201ENST00000384685 113 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 MIR590-201ENST00000385008 97 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 SNORA26.2-201ENST00000390922 122 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 RNY4P29-201ENST00000410801 97 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 AC003685.2-201ENST00000422795 395 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 AL445646.1-201ENST00000431784 216 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 Z96811.1-201ENST00000445880 108 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 TRBV12-1-201ENST00000479785 344 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 SNORD45.4-201ENST00000516629 73 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
SOX4Q06945 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SOX4Q06945 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX4Q06945 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX4Q06945 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SOX4Q06945 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SOX4Q06945 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SOX4Q06945 Y_RNA.440-201ENST00000384120 114 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 RNU6-1072P-201ENST00000384703 107 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 RNU6-443P-201ENST00000384780 107 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 MIR196B-201ENST00000384852 84 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 RNU6-938P-201ENST00000411285 103 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 CST2P1-201ENST00000425770 87 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 RNU7-164P-201ENST00000459221 62 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 MIR4513-201ENST00000581077 86 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 CTSLP2-204ENST00000629029 392 ntBASIC2.88□□□□□ -1.95
SOX4Q06945 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SOX4Q06945 RNU6-862P-201ENST00000362804 105 ntBASIC2.87□□□□□ -1.95
SOX4Q06945 MIR488-201ENST00000365739 83 ntBASIC2.87□□□□□ -1.95
SOX4Q06945 Y_RNA.388-201ENST00000383919 113 ntBASIC2.87□□□□□ -1.95
SOX4Q06945 RNU6-160P-201ENST00000384591 107 ntBASIC2.87□□□□□ -1.95
SOX4Q06945 RNU6-762P-201ENST00000517107 102 ntBASIC2.87□□□□□ -1.95
SOX4Q06945 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.87□□□□□ -1.95
SOX4Q06945 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
SOX4Q06945 ICE2P2-201ENST00000483823 2787 ntBASIC2.87□□□□□ -1.95
SOX4Q06945 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SOX4Q06945 AC245060.5-201ENST00000610778 3293 ntBASIC2.87□□□□□ -1.95
SOX4Q06945 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SOX4Q06945 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SOX4Q06945 Y_RNA.336-201ENST00000365307 109 ntBASIC2.86□□□□□ -1.95
SOX4Q06945 Y_RNA.344-201ENST00000365381 112 ntBASIC2.86□□□□□ -1.95
SOX4Q06945 Y_RNA.351-201ENST00000365436 96 ntBASIC2.86□□□□□ -1.95
SOX4Q06945 RNU6-1104P-201ENST00000384723 104 ntBASIC2.86□□□□□ -1.95
SOX4Q06945 SNORA19.1-201ENST00000410656 129 ntBASIC2.86□□□□□ -1.95
SOX4Q06945 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
SOX4Q06945 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.86□□□□□ -1.95
SOX4Q06945 SNORA18.7-201ENST00000516910 131 ntBASIC2.86□□□□□ -1.95
SOX4Q06945 AP003484.1-201ENST00000530974 250 ntBASIC2.86□□□□□ -1.95
SOX4Q06945 AC084364.2-201ENST00000546924 395 ntBASIC2.86□□□□□ -1.95
SOX4Q06945 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SOX4Q06945 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SOX4Q06945 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SOX4Q06945 AL596211.1-201ENST00000569873 2277 ntBASIC2.85□□□□□ -1.95
SOX4Q06945 SNORD56.5-201ENST00000364281 72 ntBASIC2.85□□□□□ -1.95
SOX4Q06945 U8.9-201ENST00000365667 134 ntBASIC2.85□□□□□ -1.95
SOX4Q06945 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SOX4Q06945 SNORA80E-201ENST00000384744 137 ntBASIC2.85□□□□□ -1.95
SOX4Q06945 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SOX4Q06945 MIR1262-201ENST00000408276 93 ntBASIC2.85□□□□□ -1.95
SOX4Q06945 AC009238.1-201ENST00000442165 424 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms