Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 RNA5SP450-201ENST00000411206 102 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 AC245047.3-201ENST00000429428 127 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 SEPT7P4-201ENST00000437076 306 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 HMGN1P7-201ENST00000491722 313 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 MTND5P41-201ENST00000517498 206 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 SUB1P4-201ENST00000566062 339 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 AC021753.1-201ENST00000635724 168 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.01□□□□□ -2.09
E2F1Q01094 SNORA63D-201ENST00000364359 132 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 SNORD113-1-201ENST00000365321 69 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.01□□□□□ -2.09
E2F1Q01094 AL392103.1-201ENST00000447000 198 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 AL049830.1-201ENST00000468034 425 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 RNU6-561P-201ENST00000516222 102 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 RNU2-56P-201ENST00000516826 190 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 MIR4431-201ENST00000579990 94 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 AL049861.1-201ENST00000603130 150 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 AP000942.3-201ENST00000603702 160 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 JPX_2.1-201ENST00000614161 69 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 uc_338.4-201ENST00000616635 176 ntBASIC2.01□□□□□ -2.09
E2F1Q01094 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
E2F1Q01094 Y_RNA.170-201ENST00000363746 110 ntBASIC2□□□□□ -2.09
E2F1Q01094 RNU4-84P-201ENST00000364200 139 ntBASIC2□□□□□ -2.09
E2F1Q01094 RNU6-818P-201ENST00000364837 108 ntBASIC2□□□□□ -2.09
E2F1Q01094 Y_RNA.338-201ENST00000365320 114 ntBASIC2□□□□□ -2.09
E2F1Q01094 RNU6-728P-201ENST00000365375 104 ntBASIC2□□□□□ -2.09
E2F1Q01094 RNU6-746P-201ENST00000384112 109 ntBASIC2□□□□□ -2.09
E2F1Q01094 MIR15B-201ENST00000385045 98 ntBASIC2□□□□□ -2.09
E2F1Q01094 Y_RNA.587-201ENST00000391210 103 ntBASIC2□□□□□ -2.09
E2F1Q01094 MIR548I2-201ENST00000408348 149 ntBASIC2□□□□□ -2.09
E2F1Q01094 RNU4-43P-201ENST00000410628 137 ntBASIC2□□□□□ -2.09
E2F1Q01094 AL121914.1-201ENST00000450188 156 ntBASIC2□□□□□ -2.09
E2F1Q01094 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2□□□□□ -2.09
E2F1Q01094 NDUFA4P2-201ENST00000489989 244 ntBASIC2□□□□□ -2.09
E2F1Q01094 MIR3144-201ENST00000579460 79 ntBASIC2□□□□□ -2.09
E2F1Q01094 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
E2F1Q01094 AL591926.4-201ENST00000616895 298 ntBASIC2□□□□□ -2.09
E2F1Q01094 Y_RNA.140-201ENST00000363474 103 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 SNORD45.3-201ENST00000363836 72 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 Y_RNA.272-201ENST00000364696 102 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 RNU6-804P-201ENST00000384286 107 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
E2F1Q01094 RNU2-55P-201ENST00000411146 174 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 SNRPGP10-201ENST00000432323 225 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 SNRPGP8-201ENST00000454064 226 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.99□□□□□ -2.09
E2F1Q01094 SNORD77.4-201ENST00000516158 81 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.99□□□□□ -2.09
E2F1Q01094 AC104465.1-201ENST00000611365 139 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 MIR8054-201ENST00000620877 86 ntBASIC1.99□□□□□ -2.09
E2F1Q01094 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
E2F1Q01094 Y_RNA.357-201ENST00000365487 109 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 Y_RNA.580-201ENST00000391004 95 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 Y_RNA.622-201ENST00000411091 108 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 AL606753.1-201ENST00000427435 87 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 AC023449.1-201ENST00000454464 154 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.98□□□□□ -2.09
E2F1Q01094 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 MIR514B-201ENST00000516774 80 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 RNU2-19P-201ENST00000517288 84 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
E2F1Q01094 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.98□□□□□ -2.09
E2F1Q01094 MIR6845-201ENST00000613182 61 ntBASIC1.98□□□□□ -2.09
E2F1Q01094 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
E2F1Q01094 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
E2F1Q01094 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
E2F1Q01094 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
E2F1Q01094 MIR126-201ENST00000362291 85 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU1-17P-201ENST00000363022 152 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU6-112P-201ENST00000363599 104 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU6-1138P-201ENST00000365359 106 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU6-484P-201ENST00000384016 107 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU6-643P-201ENST00000384018 107 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU6-296P-201ENST00000384608 107 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 MIR520A-201ENST00000384862 85 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 MIR522-201ENST00000385071 87 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU6-440P-201ENST00000390882 105 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU6-239P-201ENST00000390990 99 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNA5SP482-201ENST00000391269 118 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 AC055731.1-201ENST00000474387 401 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 SNORA31.10-201ENST00000516482 106 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU7-121P-201ENST00000516604 62 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 RNU7-28P-201ENST00000516759 62 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 MIR4762-201ENST00000585261 75 ntBASIC1.97□□□□□ -2.09
E2F1Q01094 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 U8.5-201ENST00000364528 136 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 Y_RNA.398-201ENST00000383952 99 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 SNORA12.1-201ENST00000390873 148 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 FTH1P12-201ENST00000432137 551 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 OR9P1P-201ENST00000496431 281 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 AC107027.2-201ENST00000512197 115 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 RNU7-149P-201ENST00000516739 59 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms