Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.77□□□□□ -1.97
ERVFC1P60507 SNORD73B-201ENST00000364394 72 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 SNORD114-30-201ENST00000364448 72 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 SNORA68.1-201ENST00000364537 132 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 RNU1-109P-201ENST00000383960 147 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 Y_RNA.410-201ENST00000383992 113 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 SNORA51.5-201ENST00000384126 131 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ERVFC1P60507 RNU6-1186P-201ENST00000410429 97 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 snoU13.15-201ENST00000459407 104 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 UBL5P3-201ENST00000475112 231 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 RNU6-237P-201ENST00000515985 71 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 RNA5SP281-201ENST00000516504 135 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 RPPH1-2P-201ENST00000516688 293 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 AL359075.3-201ENST00000613288 217 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 MIR6079-201ENST00000635807 62 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 U6.108-201ENST00000637764 58 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 ZNF271P-202ENST00000465539 1970 ntBASIC2.77□□□□□ -1.97
ERVFC1P60507 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ERVFC1P60507 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.77□□□□□ -1.97
ERVFC1P60507 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
ERVFC1P60507 AL589743.1-201ENST00000551932 2712 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 MIR27B-201ENST00000385129 97 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.76□□□□□ -1.97
ERVFC1P60507 AC233266.1-201ENST00000454518 96 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.76□□□□□ -1.97
ERVFC1P60507 RNU6-1291P-201ENST00000516591 104 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 MIR3199-1-201ENST00000582434 88 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 AC242852.1-201ENST00000612151 96 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 AC134878.1-201ENST00000619901 243 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 AC244015.1-201ENST00000622301 99 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 MIR338-201ENST00000636369 67 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 MIR376A2-201ENST00000636782 80 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 MIR7515-201ENST00000637837 67 ntBASIC2.76□□□□□ -1.97
ERVFC1P60507 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ERVFC1P60507 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
ERVFC1P60507 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.76□□□□□ -1.97
ERVFC1P60507 RNU1-23P-201ENST00000363361 144 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 RNY4P6-201ENST00000363667 96 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 RNU6-294P-201ENST00000364999 102 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 Y_RNA.544-201ENST00000384650 113 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 MIR522-201ENST00000385071 87 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 AL117342.1-201ENST00000404861 406 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 RNU4-53P-201ENST00000410828 140 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 AC099677.2-201ENST00000436385 175 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 RPS29P6-201ENST00000438196 145 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 HMGN2P32-201ENST00000444648 269 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 RPL39P34-201ENST00000477141 156 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 RNU6-991P-201ENST00000516168 107 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 SNORA40.13-201ENST00000516379 120 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.75□□□□□ -1.97
ERVFC1P60507 MIR4635-201ENST00000583759 79 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 AC006441.5-201ENST00000612680 209 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 AL035470.1-201ENST00000622571 220 ntBASIC2.75□□□□□ -1.97
ERVFC1P60507 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
ERVFC1P60507 MIR126-201ENST00000362291 85 ntBASIC2.74□□□□□ -1.97
ERVFC1P60507 RNU6-743P-201ENST00000364151 106 ntBASIC2.74□□□□□ -1.97
ERVFC1P60507 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
ERVFC1P60507 MIR218-1-201ENST00000384999 110 ntBASIC2.74□□□□□ -1.97
ERVFC1P60507 MIR504-201ENST00000385065 83 ntBASIC2.74□□□□□ -1.97
ERVFC1P60507 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.74□□□□□ -1.97
ERVFC1P60507 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
ERVFC1P60507 U4.3-201ENST00000621047 82 ntBASIC2.74□□□□□ -1.97
ERVFC1P60507 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
ERVFC1P60507 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ERVFC1P60507 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ERVFC1P60507 RNU6-461P-201ENST00000364195 107 ntBASIC2.73□□□□□ -1.97
ERVFC1P60507 RNA5SP467-201ENST00000391274 118 ntBASIC2.73□□□□□ -1.97
ERVFC1P60507 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.73□□□□□ -1.97
ERVFC1P60507 RNU7-94P-201ENST00000459576 63 ntBASIC2.73□□□□□ -1.97
ERVFC1P60507 RNU6-240P-201ENST00000516098 97 ntBASIC2.73□□□□□ -1.97
ERVFC1P60507 AC004486.1-201ENST00000546846 233 ntBASIC2.73□□□□□ -1.97
ERVFC1P60507 MIR4524B-201ENST00000581569 115 ntBASIC2.73□□□□□ -1.97
ERVFC1P60507 MIR4762-201ENST00000585261 75 ntBASIC2.73□□□□□ -1.97
ERVFC1P60507 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
ERVFC1P60507 RNU6-349P-201ENST00000362402 107 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 Y_RNA.78-201ENST00000362970 110 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 Y_RNA.362-201ENST00000365518 110 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 Y_RNA.558-201ENST00000384685 113 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 MIR181B1-201ENST00000385240 110 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 AP004217.1-201ENST00000480579 346 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 RNU1-142P-201ENST00000516682 145 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 AP002004.2-201ENST00000531656 154 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.72□□□□□ -1.97
ERVFC1P60507 MIR4769-201ENST00000584126 77 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 AL161431.1-201ENST00000618966 4205 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
ERVFC1P60507 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
ERVFC1P60507 ZNF720P1-201ENST00000562403 1939 ntBASIC2.72□□□□□ -1.97
ERVFC1P60507 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
ERVFC1P60507 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
ERVFC1P60507 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.71□□□□□ -1.98
ERVFC1P60507 SNORA63.5-201ENST00000363548 123 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 Y_RNA.213-201ENST00000364178 111 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 U8.5-201ENST00000364528 136 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 RNU6-1189P-201ENST00000383958 107 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 MIR515-2-201ENST00000384883 83 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 MIR515-1-201ENST00000384884 83 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 SNRPGP14-201ENST00000435400 219 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms