Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD11P31277 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD11P31277 AL162151.2-201ENST00000448875 158 ntBASIC4.72□□□□□ -1.65
HOXD11P31277 ABCF2P2-201ENST00000450549 296 ntBASIC4.72□□□□□ -1.65
HOXD11P31277 MIR514B-201ENST00000516774 80 ntBASIC4.72□□□□□ -1.65
HOXD11P31277 SNORD59.2-201ENST00000516873 68 ntBASIC4.72□□□□□ -1.65
HOXD11P31277 MTRNR2L2-201ENST00000604882 87 ntBASIC4.72□□□□□ -1.65
HOXD11P31277 AC009093.8-201ENST00000641769 292 ntBASIC4.72□□□□□ -1.65
HOXD11P31277 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HOXD11P31277 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD11P31277 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXD11P31277 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HOXD11P31277 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD11P31277 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXD11P31277 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD11P31277 MIR383-201ENST00000362257 73 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 RNA5SP48-201ENST00000363969 126 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 RNU6-301P-201ENST00000384277 107 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 RNA5SP299-201ENST00000391203 116 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD11P31277 COX5BP7-201ENST00000414780 274 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 BX510359.4-201ENST00000423750 193 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 BX323845.1-201ENST00000432417 179 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD11P31277 RN7SL290P-201ENST00000578661 300 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 MIR4474-201ENST00000579189 78 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 MIR6867-201ENST00000610636 67 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 AC140113.4-201ENST00000622087 222 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD11P31277 AP006437.1-201ENST00000641440 3685 ntBASIC4.71□□□□□ -1.66
HOXD11P31277 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXD11P31277 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXD11P31277 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HOXD11P31277 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD11P31277 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD11P31277 RNA5SP124-201ENST00000362739 110 ntBASIC4.7□□□□□ -1.66
HOXD11P31277 AC011998.1-201ENST00000433403 117 ntBASIC4.7□□□□□ -1.66
HOXD11P31277 AL078603.1-201ENST00000603824 313 ntBASIC4.7□□□□□ -1.66
HOXD11P31277 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HOXD11P31277 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD11P31277 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD11P31277 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD11P31277 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD11P31277 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD11P31277 RN7SL98P-201ENST00000462271 300 ntBASIC4.69□□□□□ -1.66
HOXD11P31277 RNA5SP481-201ENST00000516814 122 ntBASIC4.69□□□□□ -1.66
HOXD11P31277 RNA5SP437-201ENST00000517249 129 ntBASIC4.69□□□□□ -1.66
HOXD11P31277 NDUFB9P3-201ENST00000521269 501 ntBASIC4.69□□□□□ -1.66
HOXD11P31277 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD11P31277 GTF3AP2-201ENST00000557014 266 ntBASIC4.69□□□□□ -1.66
HOXD11P31277 AC244107.2-201ENST00000611773 76 ntBASIC4.69□□□□□ -1.66
HOXD11P31277 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD11P31277 AL035425.3-201ENST00000564206 4996 ntBASIC4.69□□□□□ -1.66
HOXD11P31277 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXD11P31277 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD11P31277 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXD11P31277 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD11P31277 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HOXD11P31277 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXD11P31277 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
HOXD11P31277 RNU6-396P-201ENST00000365369 105 ntBASIC4.68□□□□□ -1.66
HOXD11P31277 RNA5SP146-201ENST00000410743 123 ntBASIC4.68□□□□□ -1.66
HOXD11P31277 AL139132.1-201ENST00000431587 344 ntBASIC4.68□□□□□ -1.66
HOXD11P31277 RNA5SP392-201ENST00000516905 112 ntBASIC4.68□□□□□ -1.66
HOXD11P31277 AC015688.6-201ENST00000577737 104 ntBASIC4.68□□□□□ -1.66
HOXD11P31277 MIR4264-201ENST00000583520 66 ntBASIC4.68□□□□□ -1.66
HOXD11P31277 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD11P31277 AL450345.1-202ENST00000605741 3881 ntBASIC4.68□□□□□ -1.66
HOXD11P31277 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HOXD11P31277 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD11P31277 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD11P31277 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD11P31277 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD11P31277 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD11P31277 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD11P31277 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD11P31277 MAPK10-253ENST00000641010 4072 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD11P31277 SNORA25.3-201ENST00000363205 127 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 RNU11-3P-201ENST00000391111 133 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 SNORD93-201ENST00000408813 74 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 RNU7-62P-201ENST00000458856 62 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD11P31277 RNU6-322P-201ENST00000516010 103 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 AC022726.1-201ENST00000587475 207 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 MIR8059-201ENST00000620427 81 ntBASIC4.67□□□□□ -1.66
HOXD11P31277 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD11P31277 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD11P31277 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD11P31277 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD11P31277 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD11P31277 AL360270.2-201ENST00000562952 5985 ntBASIC4.66□□□□□ -1.66
HOXD11P31277 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
HOXD11P31277 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HOXD11P31277 RNU6-403P-201ENST00000363163 104 ntBASIC4.66□□□□□ -1.66
HOXD11P31277 COX6CP13-201ENST00000428703 226 ntBASIC4.66□□□□□ -1.66
HOXD11P31277 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD11P31277 RNU6-92P-201ENST00000605893 104 ntBASIC4.66□□□□□ -1.66
HOXD11P31277 AL121772.2-201ENST00000614331 297 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms