Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MIR4452-201ENST00000583004 71 ntBASIC2.11□□□□□ -2.07
KCNA3P22001 MIR3935-201ENST00000583472 104 ntBASIC2.11□□□□□ -2.07
KCNA3P22001 AL929325.1-201ENST00000603096 117 ntBASIC2.11□□□□□ -2.07
KCNA3P22001 RMST_2.1-201ENST00000617263 136 ntBASIC2.11□□□□□ -2.07
KCNA3P22001 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KCNA3P22001 RNU1-42P-201ENST00000364033 160 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 Y_RNA.203-201ENST00000364106 102 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 RNU6-47P-201ENST00000383866 107 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 RNU6-969P-201ENST00000383900 105 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 RNU6-918P-201ENST00000391219 106 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 RNU6-383P-201ENST00000410864 94 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 AC245047.4-201ENST00000433189 144 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 HMGN1P7-201ENST00000491722 313 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 AL358944.1-201ENST00000528537 144 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 AP002004.2-201ENST00000531656 154 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 MIR4308-201ENST00000580634 81 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 AC078899.2-201ENST00000595282 212 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 AC098479.1-201ENST00000609225 154 ntBASIC2.1□□□□□ -2.07
KCNA3P22001 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KCNA3P22001 Y_RNA.7-201ENST00000362352 102 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
KCNA3P22001 RNU6-381P-201ENST00000391259 108 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 PIGPP3-201ENST00000425307 415 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 RNU1-123P-201ENST00000458950 160 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 RNU7-120P-201ENST00000459334 63 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.09□□□□□ -2.07
KCNA3P22001 RN7SKP164-201ENST00000516138 266 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 RNA5SP102-201ENST00000516865 106 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 MIR2681-201ENST00000581814 105 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 AC022217.4-201ENST00000604389 163 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 AC072026.1-201ENST00000605023 201 ntBASIC2.09□□□□□ -2.07
KCNA3P22001 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.09□□□□□ -2.07
KCNA3P22001 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.09□□□□□ -2.08
KCNA3P22001 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KCNA3P22001 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
KCNA3P22001 Y_RNA.191-201ENST00000363972 113 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 RNU4-41P-201ENST00000364426 143 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 SNORA16.1-201ENST00000364597 132 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 RNU6-1080P-201ENST00000383982 107 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 Y_RNA.435-201ENST00000384095 112 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 RNA5SP109-201ENST00000391010 116 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 AL512604.1-201ENST00000404812 257 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 AC245047.3-201ENST00000429428 127 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 RNU2-56P-201ENST00000516826 190 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 SUB1P4-201ENST00000566062 339 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 AC012640.5-201ENST00000623897 319 ntBASIC2.08□□□□□ -2.08
KCNA3P22001 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.08□□□□□ -2.08
KCNA3P22001 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KCNA3P22001 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KCNA3P22001 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
KCNA3P22001 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
KCNA3P22001 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
KCNA3P22001 SNORA1B-201ENST00000362535 133 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 Y_RNA.121-201ENST00000363309 113 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 RNU4-70P-201ENST00000384579 139 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 Y_RNA.571-201ENST00000384753 98 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 Y_RNA.572-201ENST00000384757 98 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 RNA5SP496-201ENST00000391240 109 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.07□□□□□ -2.08
KCNA3P22001 RPS27P1-201ENST00000450552 247 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 AL049830.1-201ENST00000468034 425 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 RN7SL274P-201ENST00000492268 272 ntBASIC2.07□□□□□ -2.08
KCNA3P22001 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.07□□□□□ -2.08
KCNA3P22001 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.07□□□□□ -2.08
KCNA3P22001 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.07□□□□□ -2.08
KCNA3P22001 RNU6-103P-201ENST00000363686 107 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 snoU2_19.4-201ENST00000364329 80 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 Y_RNA.229-201ENST00000364347 113 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 SNORA63D-201ENST00000364359 132 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 Y_RNA.233-201ENST00000364407 101 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 SNORD114-22-201ENST00000365423 72 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 MIR520A-201ENST00000384862 85 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 MIR616-201ENST00000385293 97 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KCNA3P22001 AL606517.2-201ENST00000442855 241 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 AC009474.2-201ENST00000451383 136 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 AC022559.1-201ENST00000520905 205 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 RNU2-4P-201ENST00000606190 192 ntBASIC2.06□□□□□ -2.08
KCNA3P22001 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KCNA3P22001 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.06□□□□□ -2.08
KCNA3P22001 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
KCNA3P22001 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
KCNA3P22001 SNORA7.1-201ENST00000363750 139 ntBASIC2.05□□□□□ -2.08
KCNA3P22001 MIR1278-201ENST00000408753 81 ntBASIC2.05□□□□□ -2.08
KCNA3P22001 RNU2-7P-201ENST00000410794 178 ntBASIC2.05□□□□□ -2.08
KCNA3P22001 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.05□□□□□ -2.08
KCNA3P22001 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.05□□□□□ -2.08
KCNA3P22001 AL391903.3-201ENST00000612158 163 ntBASIC2.05□□□□□ -2.08
KCNA3P22001 JPX_2.1-201ENST00000614161 69 ntBASIC2.05□□□□□ -2.08
KCNA3P22001 FTX_2.1-201ENST00000618816 94 ntBASIC2.05□□□□□ -2.08
KCNA3P22001 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
KCNA3P22001 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KCNA3P22001 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KCNA3P22001 RNU6-112P-201ENST00000363599 104 ntBASIC2.04□□□□□ -2.08
KCNA3P22001 RNU6-1209P-201ENST00000363655 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms