Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNY4P29-201ENST00000410801 97 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 AL445646.1-201ENST00000431784 216 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 RPS26P48-201ENST00000491713 339 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 AL163195.1-201ENST00000496941 348 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 SNORA18.7-201ENST00000516910 131 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 AC024995.1-201ENST00000523014 93 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD8P13378 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD8P13378 AC015726.2-201ENST00000620112 122 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HOXD8P13378 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD8P13378 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD8P13378 RNU6-1072P-201ENST00000384703 107 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 RNU6-443P-201ENST00000384780 107 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 CST2P1-201ENST00000425770 87 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 AC009238.1-201ENST00000442165 424 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 AC009237.6-201ENST00000446969 424 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 AC092185.1-201ENST00000491371 97 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD8P13378 SNORA40.13-201ENST00000516379 120 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 RNU6-638P-201ENST00000516582 104 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 MIR4524B-201ENST00000581569 115 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 CTSLP2-204ENST00000629029 392 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 ZNF720P1-201ENST00000562403 1939 ntBASIC3.08□□□□□ -1.92
HOXD8P13378 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HOXD8P13378 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD8P13378 AC093831.2-201ENST00000624393 3427 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD8P13378 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD8P13378 Y_RNA.37-201ENST00000362606 108 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 RNU6-862P-201ENST00000362804 105 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 SNORD114-6-201ENST00000364393 72 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 RNU6-1131P-201ENST00000364955 107 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 Y_RNA.348-201ENST00000365403 103 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 Y_RNA.362-201ENST00000365518 110 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD8P13378 RNU6-905P-201ENST00000384434 107 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXD8P13378 SUMO2P16-201ENST00000519475 264 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 AP001318.4-201ENST00000616637 121 ntBASIC3.07□□□□□ -1.92
HOXD8P13378 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HOXD8P13378 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD8P13378 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXD8P13378 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXD8P13378 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXD8P13378 RNY1P6-201ENST00000384193 109 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 SNORA51.10-201ENST00000384418 136 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 Y_RNA.544-201ENST00000384650 113 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 Y_RNA.547-201ENST00000384654 119 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 SNORA67.4-201ENST00000384688 142 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXD8P13378 AC003685.2-201ENST00000422795 395 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 AC245047.3-201ENST00000429428 127 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 RNU1-131P-201ENST00000458943 161 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 RNU7-164P-201ENST00000459221 62 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 AC018868.1-201ENST00000491307 315 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 SNORD45.4-201ENST00000516629 73 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 AC006441.5-201ENST00000612680 209 ntBASIC3.06□□□□□ -1.92
HOXD8P13378 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXD8P13378 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HOXD8P13378 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXD8P13378 AL596211.1-201ENST00000569873 2277 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HOXD8P13378 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXD8P13378 SNORD115-3-201ENST00000363100 82 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 RNU6-268P-201ENST00000364174 107 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HOXD8P13378 RNA5SP508-201ENST00000411327 119 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 AC003982.1-202ENST00000469928 248 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 RNA5SP282-201ENST00000516355 108 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 SNORD36C-201ENST00000516733 66 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 SNORA31.26-201ENST00000517250 137 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.05□□□□□ -1.92
HOXD8P13378 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXD8P13378 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD8P13378 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HOXD8P13378 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD8P13378 MIR26A1-201ENST00000362205 77 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 MIR342-201ENST00000362212 99 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 RNU6-23P-201ENST00000363283 107 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 RNU6-640P-201ENST00000363693 105 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 Y_RNA.323-201ENST00000365157 109 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 Y_RNA.351-201ENST00000365436 96 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 SNORA80E-201ENST00000384744 137 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 RNA5SP482-201ENST00000391269 118 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 SNORA11.4-201ENST00000408823 129 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD8P13378 SNX2P2-201ENST00000424553 323 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 AC141557.1-201ENST00000540982 400 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 MIR4778-201ENST00000577635 80 ntBASIC3.04□□□□□ -1.92
HOXD8P13378 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD8P13378 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HOXD8P13378 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD8P13378 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD8P13378 AP006437.1-201ENST00000641440 3685 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms