Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.59□□□□□ -2.15
COL5A2P05997 AC018868.1-201ENST00000491307 315 ntBASIC1.59□□□□□ -2.15
COL5A2P05997 RNU6-1219P-201ENST00000516143 112 ntBASIC1.59□□□□□ -2.15
COL5A2P05997 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL5A2P05997 Y_RNA.180-201ENST00000363867 113 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 RNU6-899P-201ENST00000363947 107 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 SNORA72.4-201ENST00000384174 132 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 Y_RNA.456-201ENST00000384232 111 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 RNU4-70P-201ENST00000384579 139 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 MIR598-201ENST00000384868 97 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 PCNPP3-201ENST00000393579 471 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 MIR548M-201ENST00000408260 86 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 RNU6-1186P-201ENST00000410429 97 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 AC060773.1-201ENST00000421698 310 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 HMGN2P34-201ENST00000437647 269 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 AC104332.1-201ENST00000440471 797 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 MTCO1P44-201ENST00000441935 243 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A2P05997 RNU6-1041P-201ENST00000516254 102 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 SNORA48.11-201ENST00000517015 89 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL5A2P05997 MRPS18CP4-201ENST00000535821 231 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 POLR3GP1-201ENST00000594073 261 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 AC078899.2-201ENST00000595282 212 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 AL096840.1-201ENST00000603287 93 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 AC072026.1-201ENST00000605023 201 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 AC022202.1-201ENST00000613515 211 ntBASIC1.58□□□□□ -2.16
COL5A2P05997 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL5A2P05997 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
COL5A2P05997 RNU6-1205P-201ENST00000363625 106 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 Y_RNA.332-201ENST00000365271 113 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 RNU6-1235P-201ENST00000384559 107 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 MIR758-201ENST00000390227 88 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 SNORA40.19-201ENST00000390846 128 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 RNA5SP467-201ENST00000391274 118 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 MIR873-201ENST00000401120 77 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 AL603908.1-201ENST00000406098 201 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 RNU6-498P-201ENST00000459468 107 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 RNU6-1278P-201ENST00000516130 107 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 RNU6-453P-201ENST00000516819 85 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.57□□□□□ -2.16
COL5A2P05997 AC021753.1-201ENST00000635724 168 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 AL159152.1-201ENST00000635019 2587 ntBASIC1.57□□□□□ -2.16
COL5A2P05997 MIR340-201ENST00000362125 95 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 Y_RNA.7-201ENST00000362352 102 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 Y_RNA.182-201ENST00000363880 111 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 RNU6-969P-201ENST00000383900 105 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 Y_RNA.571-201ENST00000384753 98 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 MT-TT-201ENST00000387460 66 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 SNORA36B-201ENST00000410438 131 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 AC008134.1-201ENST00000420943 193 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.56□□□□□ -2.16
COL5A2P05997 AC245047.8-201ENST00000456455 284 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 RPS26P55-201ENST00000471178 356 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 RNU7-193P-201ENST00000516723 65 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 MIR4438-201ENST00000585271 93 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.56□□□□□ -2.16
COL5A2P05997 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 U6.106-201ENST00000636360 105 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL5A2P05997 RNU6-271P-201ENST00000363858 105 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 snoU2_19.4-201ENST00000364329 80 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.56□□□□□ -2.16
COL5A2P05997 RNU6-804P-201ENST00000384286 107 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 SNORA8.3-201ENST00000384679 139 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 MIR626-201ENST00000385032 94 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 MIR1262-201ENST00000408276 93 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 MIR1278-201ENST00000408753 81 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 RPL23AP54-201ENST00000495129 419 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 SCARNA8-201ENST00000515924 131 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 RNU7-115P-201ENST00000516433 55 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 RNU6-255P-201ENST00000516957 105 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 MIR3684-201ENST00000579779 74 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 AC005972.2-201ENST00000604690 348 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 Y_RNA.802-201ENST00000614892 130 ntBASIC1.56□□□□□ -2.16
COL5A2P05997 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL5A2P05997 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
COL5A2P05997 SNORA16B-201ENST00000364674 135 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 Y_RNA.361-201ENST00000365515 120 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 AL357134.1-201ENST00000445848 426 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 HSPE1P13-201ENST00000451143 297 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.55□□□□□ -2.16
COL5A2P05997 AC011406.1-201ENST00000512440 370 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 Y_RNA.797-201ENST00000515977 94 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 RNU6-1007P-201ENST00000516586 107 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 RNU7-172P-201ENST00000517125 64 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 AC019176.1-201ENST00000518519 225 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.55□□□□□ -2.16
COL5A2P05997 AL078604.3-201ENST00000615580 211 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 MIR548AY-201ENST00000617669 107 ntBASIC1.55□□□□□ -2.16
COL5A2P05997 RNU4-17P-201ENST00000365598 141 ntBASIC1.54□□□□□ -2.16
COL5A2P05997 RNU6-187P-201ENST00000384139 106 ntBASIC1.54□□□□□ -2.16
COL5A2P05997 RNU6-376P-201ENST00000384731 106 ntBASIC1.54□□□□□ -2.16
COL5A2P05997 AC091021.1-201ENST00000468051 388 ntBASIC1.54□□□□□ -2.16
COL5A2P05997 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.54□□□□□ -2.16
COL5A2P05997 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.54□□□□□ -2.16
COL5A2P05997 RNU6-346P-201ENST00000516288 111 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms