Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS4BO75351 RNU4-84P-201ENST00000364200 139 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 U8.5-201ENST00000364528 136 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 RNU6-1138P-201ENST00000365359 106 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 MIR221-201ENST00000385135 110 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 Y_RNA.580-201ENST00000391004 95 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 RNA5SP100-201ENST00000410903 110 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 RNA5SP59-201ENST00000410922 110 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 SNRPGP8-201ENST00000454064 226 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 NDUFA4P2-201ENST00000489989 244 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 RNU6-561P-201ENST00000516222 102 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 RNU7-121P-201ENST00000516604 62 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 RNU6-295P-201ENST00000516901 104 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 RNU6-255P-201ENST00000516957 105 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 AP000942.3-201ENST00000603702 160 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 AL591926.4-201ENST00000616895 298 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
VPS4BO75351 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
VPS4BO75351 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
VPS4BO75351 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
VPS4BO75351 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 RNU6-728P-201ENST00000365375 104 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 RNU6-484P-201ENST00000384016 107 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 MIR520A-201ENST00000384862 85 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 MIR522-201ENST00000385071 87 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 SNORA12.1-201ENST00000390873 148 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 RNU6-440P-201ENST00000390882 105 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 RNA5SP482-201ENST00000391269 118 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 FTH1P12-201ENST00000432137 551 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 RNU6-1053P-201ENST00000515930 101 ntBASIC2.08□□□□□ -2.08
VPS4BO75351 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS4BO75351 Y_RNA.226-201ENST00000364337 114 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VPS4BO75351 Y_RNA.587-201ENST00000391210 103 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 Y_RNA.621-201ENST00000411065 96 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 SNRPGP10-201ENST00000432323 225 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 SEPT7P4-201ENST00000437076 306 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VPS4BO75351 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS4BO75351 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 RNU2-56P-201ENST00000516826 190 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 MIR3144-201ENST00000579460 79 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 AC087685.1-201ENST00000587507 141 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 AL049861.1-201ENST00000603130 150 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS4BO75351 JPX_2.1-201ENST00000614161 69 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.07□□□□□ -2.08
VPS4BO75351 SNORD45.3-201ENST00000363836 72 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 Y_RNA.272-201ENST00000364696 102 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 SNORA64-201ENST00000384674 134 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 MIR15B-201ENST00000385045 98 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 AL603908.1-201ENST00000406098 201 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 OR9P1P-201ENST00000496431 281 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 RNA5SP437-201ENST00000517249 129 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 AC097639.2-201ENST00000603159 172 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 AL365434.2-201ENST00000607979 234 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 MIR7111-201ENST00000619751 72 ntBASIC2.06□□□□□ -2.08
VPS4BO75351 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VPS4BO75351 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS4BO75351 MIR126-201ENST00000362291 85 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 RNU6-950P-201ENST00000384651 107 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 RNU6-239P-201ENST00000390990 99 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 SNORA26.9-201ENST00000391322 122 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 SUMO1P3-201ENST00000439961 304 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 AL121914.1-201ENST00000450188 156 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 AC023449.1-201ENST00000454464 154 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 RNA5SP153-201ENST00000516498 76 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 RNU6-126P-201ENST00000516685 103 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS4BO75351 MIR4662B-201ENST00000579498 81 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 AC008507.4-201ENST00000585464 127 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 AC092881.1-201ENST00000638218 2733 ntBASIC2.05□□□□□ -2.08
VPS4BO75351 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VPS4BO75351 Y_RNA.170-201ENST00000363746 110 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 RNY1P5-201ENST00000383890 115 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 RNU6-643P-201ENST00000384018 107 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 MIR1287-201ENST00000408492 90 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 HSPE1P9-201ENST00000440046 311 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 RNU7-149P-201ENST00000516739 59 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 SNORA28-201ENST00000606769 126 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 AC245060.5-201ENST00000610778 3293 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS4BO75351 AC021753.1-201ENST00000635724 168 ntBASIC2.04□□□□□ -2.08
VPS4BO75351 MIRLET7C-201ENST00000362160 84 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms