Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-1130P-201ENST00000365434 107 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 SNORD116-18-201ENST00000383961 92 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 Y_RNA.464-201ENST00000384282 110 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 RNU6-125P-201ENST00000384505 107 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
FOXN3O00409 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
FOXN3O00409 MIR1278-201ENST00000408753 81 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 SNORA36B-201ENST00000410438 131 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 RNU6-1135P-201ENST00000411083 103 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 AC011604.1-201ENST00000545978 196 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 MIR4713-201ENST00000582691 75 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 POLR3GP1-201ENST00000594073 261 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXN3O00409 ICE2P2-201ENST00000483823 2787 ntBASIC2.06□□□□□ -2.08
FOXN3O00409 RNU6-414P-201ENST00000363705 104 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 MIR626-201ENST00000385032 94 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 RN7SKP192-201ENST00000411291 327 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 snoU13.15-201ENST00000459407 104 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 UBL5P3-201ENST00000475112 231 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.05□□□□□ -2.08
FOXN3O00409 SNORA31.10-201ENST00000516482 106 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 RNU7-116P-201ENST00000516940 62 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 MIR3144-201ENST00000579460 79 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 MIR4648-201ENST00000580107 72 ntBASIC2.05□□□□□ -2.08
FOXN3O00409 RNU6-818P-201ENST00000364837 108 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 Y_RNA.435-201ENST00000384095 112 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 SUMO2P12-201ENST00000405924 140 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 RN7SKP200-201ENST00000410564 320 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.04□□□□□ -2.08
FOXN3O00409 AL049830.1-201ENST00000468034 425 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
FOXN3O00409 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 AL358944.1-201ENST00000528537 144 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
FOXN3O00409 MIR4724-201ENST00000579485 89 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 AP003357.1-201ENST00000604497 148 ntBASIC2.04□□□□□ -2.08
FOXN3O00409 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
FOXN3O00409 AC100821.1-201ENST00000523153 2479 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
FOXN3O00409 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
FOXN3O00409 Y_RNA.229-201ENST00000364347 113 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 RNU6-950P-201ENST00000384651 107 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 MIR504-201ENST00000385065 83 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.03□□□□□ -2.08
FOXN3O00409 RN7SKP164-201ENST00000516138 266 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 RNU6-561P-201ENST00000516222 102 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 Y_RNA.703-201ENST00000516846 111 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 RNU6-1212P-201ENST00000517023 104 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 AP002004.2-201ENST00000531656 154 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 AC127455.1-201ENST00000565496 145 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXN3O00409 AC108706.1-201ENST00000611053 297 ntBASIC2.03□□□□□ -2.08
FOXN3O00409 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXN3O00409 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
FOXN3O00409 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
FOXN3O00409 Y_RNA.272-201ENST00000364696 102 ntBASIC2.02□□□□□ -2.09
FOXN3O00409 RNU6-746P-201ENST00000384112 109 ntBASIC2.02□□□□□ -2.09
FOXN3O00409 SNORA72-201ENST00000384339 132 ntBASIC2.02□□□□□ -2.09
FOXN3O00409 MLLT10P1-201ENST00000418346 262 ntBASIC2.02□□□□□ -2.09
FOXN3O00409 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXN3O00409 AC022254.1-201ENST00000567857 235 ntBASIC2.02□□□□□ -2.09
FOXN3O00409 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
FOXN3O00409 SNORD68-201ENST00000363214 84 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 RNU6-275P-201ENST00000364910 107 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
FOXN3O00409 RNU6-578P-201ENST00000390980 103 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 AL606845.1-201ENST00000404881 255 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 AL034345.1-201ENST00000407768 123 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 RNU6-394P-201ENST00000410735 107 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 Y_RNA.622-201ENST00000411091 108 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXN3O00409 RNU6-437P-201ENST00000459408 95 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXN3O00409 MIR4744-201ENST00000581563 82 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 AC012493.3-201ENST00000604494 112 ntBASIC2.01□□□□□ -2.09
FOXN3O00409 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
FOXN3O00409 Y_RNA.75-201ENST00000362927 97 ntBASIC2□□□□□ -2.09
FOXN3O00409 RNU4-41P-201ENST00000364426 143 ntBASIC2□□□□□ -2.09
FOXN3O00409 RNU6-144P-201ENST00000383951 107 ntBASIC2□□□□□ -2.09
FOXN3O00409 RNU6-1031P-201ENST00000384773 107 ntBASIC2□□□□□ -2.09
FOXN3O00409 MIR526A2-201ENST00000390198 65 ntBASIC2□□□□□ -2.09
FOXN3O00409 RNU6-360P-201ENST00000390944 104 ntBASIC2□□□□□ -2.09
FOXN3O00409 MIR1267-201ENST00000408723 78 ntBASIC2□□□□□ -2.09
FOXN3O00409 RNU7-200P-201ENST00000516105 62 ntBASIC2□□□□□ -2.09
FOXN3O00409 AC109810.1-201ENST00000534066 224 ntBASIC2□□□□□ -2.09
FOXN3O00409 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2□□□□□ -2.09
FOXN3O00409 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2□□□□□ -2.09
FOXN3O00409 MIR4524B-201ENST00000581569 115 ntBASIC2□□□□□ -2.09
FOXN3O00409 AL049861.1-201ENST00000603130 150 ntBASIC2□□□□□ -2.09
FOXN3O00409 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2□□□□□ -2.09
FOXN3O00409 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
FOXN3O00409 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
FOXN3O00409 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2□□□□□ -2.09
FOXN3O00409 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
FOXN3O00409 Y_RNA.121-201ENST00000363309 113 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms