Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC78A2IDD5 RNU6-862P-201ENST00000362804 105 ntBASIC2.21□□□□□ -2.06
CCDC78A2IDD5 Y_RNA.622-201ENST00000411091 108 ntBASIC2.21□□□□□ -2.06
CCDC78A2IDD5 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
CCDC78A2IDD5 AC112693.2-201ENST00000556538 232 ntBASIC2.21□□□□□ -2.06
CCDC78A2IDD5 AL049861.1-201ENST00000603130 150 ntBASIC2.21□□□□□ -2.06
CCDC78A2IDD5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.21□□□□□ -2.06
CCDC78A2IDD5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC78A2IDD5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CCDC78A2IDD5 ZNF702P-202ENST00000434269 1966 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 RNU4-11P-201ENST00000365287 132 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 RNU6-131P-201ENST00000391144 107 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 AC079804.2-201ENST00000490376 200 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 AL163195.1-201ENST00000496941 348 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
CCDC78A2IDD5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC78A2IDD5 SNORA25.7-201ENST00000364375 127 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 RNU6-1117P-201ENST00000384525 104 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 RNU6-1081P-201ENST00000384537 107 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 RNU6-768P-201ENST00000384683 107 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 SNORA40-201ENST00000388090 126 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 SNORD37.2-201ENST00000391075 66 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 RNU2-70P-201ENST00000410718 179 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 AL606753.1-201ENST00000427435 87 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 FTH1P12-201ENST00000432137 551 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 AL049830.1-201ENST00000468034 425 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 RNU7-149P-201ENST00000516739 59 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 MIR4287-201ENST00000579398 78 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 MIR4762-201ENST00000585261 75 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 AC069114.2-201ENST00000604699 304 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC78A2IDD5 AC010332.2-201ENST00000613083 1904 ntBASIC2.19□□□□□ -2.06
CCDC78A2IDD5 Y_RNA.634-201ENST00000364811 113 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 RNU6-950P-201ENST00000384651 107 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC78A2IDD5 Y_RNA.586-201ENST00000391146 98 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 RNA5SP482-201ENST00000391269 118 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 RN7SKP192-201ENST00000411291 327 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 SNRPGP10-201ENST00000432323 225 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 AC099677.2-201ENST00000436385 175 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 AC233266.1-201ENST00000454518 96 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 RNA5SP233-201ENST00000459153 113 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 RNU6-365P-201ENST00000517113 106 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC78A2IDD5 MIR548AI-201ENST00000579940 88 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 AC242852.1-201ENST00000612151 96 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 Pinc.1-201ENST00000616452 154 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 AC244015.1-201ENST00000622301 99 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 AP001340.1-201ENST00000624405 217 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 AC091895.1-201ENST00000624494 256 ntBASIC2.18□□□□□ -2.06
CCDC78A2IDD5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC78A2IDD5 RNU6-978P-201ENST00000364371 103 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 U8.5-201ENST00000364528 136 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 MIR539-201ENST00000365690 78 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 RNU6-959P-201ENST00000384671 107 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 MIR504-201ENST00000385065 83 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CCDC78A2IDD5 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC78A2IDD5 RNU7-197P-201ENST00000458836 62 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 UBL5P3-201ENST00000475112 231 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 RNU6-426P-201ENST00000516464 97 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 RNU6-504P-201ENST00000516568 104 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 RNU2-56P-201ENST00000516826 190 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC78A2IDD5 TUG1_4.1-201ENST00000619464 181 ntBASIC2.17□□□□□ -2.06
CCDC78A2IDD5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC78A2IDD5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CCDC78A2IDD5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 RNU6-62P-201ENST00000516526 102 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 AC008507.4-201ENST00000585464 127 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 SNORA28-201ENST00000606769 126 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 AC022513.1-201ENST00000624512 117 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 MIR3658-201ENST00000636291 56 ntBASIC2.16□□□□□ -2.06
CCDC78A2IDD5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CCDC78A2IDD5 MIR126-201ENST00000362291 85 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 SNORA1B-201ENST00000362535 133 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 SNORA33-201ENST00000363664 130 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 SNORD24-201ENST00000383884 75 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 MIR522-201ENST00000385071 87 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 AL023284.1-201ENST00000403956 276 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 MIR1289-2-201ENST00000408360 111 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 AL356320.1-201ENST00000429616 163 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC78A2IDD5 AC090142.3-201ENST00000519012 385 ntBASIC2.15□□□□□ -2.07
CCDC78A2IDD5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms