Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MIR2681-201ENST00000581814 105 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 AC091178.2-201ENST00000584401 117 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 MIR613-201ENST00000385248 95 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 MIR1278-201ENST00000408753 81 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 RN7SKP164-201ENST00000516138 266 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-548P-201ENST00000517083 115 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
PCDHB1Q9Y5F3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-151P-201ENST00000364158 107 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-312P-201ENST00000364629 107 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-449P-201ENST00000383914 107 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 RNA5SP501-201ENST00000410990 112 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 AC233266.1-201ENST00000454518 96 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 SNORA31.11-201ENST00000516528 139 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 RNU2-19P-201ENST00000517288 84 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 AC109810.1-201ENST00000534066 224 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 AC242852.1-201ENST00000612151 96 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 AC244015.1-201ENST00000622301 99 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 AC012640.5-201ENST00000623897 319 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 MIR203B-201ENST00000636080 86 ntBASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PCDHB1Q9Y5F3 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 AL512604.1-201ENST00000404812 257 ntBASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 RNA5SP450-201ENST00000411206 102 ntBASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-426P-201ENST00000516464 97 ntBASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 AP002004.2-201ENST00000531656 154 ntBASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 SUB1P4-201ENST00000566062 339 ntBASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PCDHB1Q9Y5F3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-950P-201ENST00000384651 107 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 MIR616-201ENST00000385293 97 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 RNA5SP496-201ENST00000391240 109 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 AL606845.1-201ENST00000404881 255 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 RNVU1-2-201ENST00000516326 135 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHB1Q9Y5F3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 ZNF702P-202ENST00000434269 1966 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 RNY1P11-201ENST00000363759 113 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 SNORD113-1-201ENST00000365321 69 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 MIR520A-201ENST00000384862 85 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 AC006461.1-201ENST00000412637 326 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 CYCSP49-201ENST00000420810 319 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 AC245047.4-201ENST00000433189 144 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 RNU2-56P-201ENST00000516826 190 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 MIR4431-201ENST00000579990 94 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 AL929325.1-201ENST00000603096 117 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 AC008555.8-201ENST00000623602 2168 ntBASIC2.23□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-103P-201ENST00000363686 107 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 SNORA20-201ENST00000384662 132 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 SNORA64-201ENST00000384674 134 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 MIR569-201ENST00000385228 96 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 RNU6-239P-201ENST00000390990 99 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 RNU2-7P-201ENST00000410794 178 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 AC245047.3-201ENST00000429428 127 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 AL121914.1-201ENST00000450188 156 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 AC023449.1-201ENST00000454464 154 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 AL049830.1-201ENST00000468034 425 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 RNU7-28P-201ENST00000516759 62 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 AC022217.4-201ENST00000604389 163 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 AL353997.5-201ENST00000618886 171 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 MTND1P7-201ENST00000632801 297 ntBASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PCDHB1Q9Y5F3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 SNORA63D-201ENST00000364359 132 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms