Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CXXC1Q9P0U4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.15□□□□□ -1.9
CXXC1Q9P0U4 MTND5P32-201ENST00000560711 1802 ntBASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 RNU6-482P-201ENST00000391068 107 ntBASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 MIR548O-201ENST00000408583 114 ntBASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 BX510359.4-201ENST00000423750 193 ntBASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 HMGN2P32-201ENST00000444648 269 ntBASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 MTND5P34-201ENST00000568888 325 ntBASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 DEFB122-202ENST00000569013 197 ntBASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CXXC1Q9P0U4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 RNU6-1144P-201ENST00000384247 104 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 MIR548A2-201ENST00000384956 97 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 RNA5SP109-201ENST00000391010 116 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 AL606517.2-201ENST00000442855 241 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 SNORD45.4-201ENST00000516629 73 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 AC015712.3-201ENST00000559380 164 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 AC006441.5-201ENST00000612680 209 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 AC022513.1-201ENST00000624512 117 ntBASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CXXC1Q9P0U4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 RNU1-112P-201ENST00000364401 164 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 Y_RNA.336-201ENST00000365307 109 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 SNORA67.4-201ENST00000384688 142 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 MIR518F-201ENST00000384973 87 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 SNORA40.5-201ENST00000391061 128 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 RNU11-3P-201ENST00000391111 133 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 SNORD77.3-201ENST00000391113 65 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 AC134878.1-201ENST00000619901 243 ntBASIC3.13□□□□□ -1.91
CXXC1Q9P0U4 ZNF658B-202ENST00000615961 3375 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 SNORD58C-201ENST00000365223 64 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 Y_RNA.410-201ENST00000383992 113 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 RNU6-440P-201ENST00000390882 105 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 STAG3L5P-204ENST00000443759 179 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 RNU6-1149P-201ENST00000516810 97 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 AC084364.2-201ENST00000546924 395 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 MIR5094-201ENST00000578766 85 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 MIR8054-201ENST00000620877 86 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXXC1Q9P0U4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 RNU6-508P-201ENST00000363231 103 ntBASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 SNORA9.2-201ENST00000365361 133 ntBASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 SNORA80E-201ENST00000384744 137 ntBASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 RN7SKP192-201ENST00000411291 327 ntBASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 AL021397.1-201ENST00000451806 248 ntBASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 AC010401.1-201ENST00000463867 348 ntBASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 AC108210.2-201ENST00000503681 201 ntBASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CXXC1Q9P0U4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 RNU6-859P-201ENST00000362728 107 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 RNU6-950P-201ENST00000384651 107 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 RNA5SP465-201ENST00000391195 109 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 SNORA3.2-201ENST00000408221 125 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 Y_RNA.617-201ENST00000410920 90 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 RNA5SP236-201ENST00000516169 116 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 RNU6-113P-201ENST00000516653 101 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 MIR5197-201ENST00000583721 112 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 AL670379.3-201ENST00000605040 251 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 MIR6129-201ENST00000616087 109 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 AC073476.4-201ENST00000628409 72 ntBASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXXC1Q9P0U4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 RNA5SP68-201ENST00000363885 119 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 RNU6-268P-201ENST00000364174 107 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 Y_RNA.346-201ENST00000365385 112 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 MIR597-201ENST00000384968 97 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 RN7SKP200-201ENST00000410564 320 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 Y_RNA.651-201ENST00000459380 103 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 RNU7-25P-201ENST00000516544 62 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 RNU6-548P-201ENST00000517083 115 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 IGKV3-31-201ENST00000523109 329 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms