Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RNU2-51P-201ENST00000410708 197 ntBASIC2.19□□□□□ -2.06
VPS16Q9H269 AL356320.1-201ENST00000429616 163 ntBASIC2.19□□□□□ -2.06
VPS16Q9H269 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS16Q9H269 SNORA25.12-201ENST00000516202 82 ntBASIC2.19□□□□□ -2.06
VPS16Q9H269 RNA5SP364-201ENST00000516938 78 ntBASIC2.19□□□□□ -2.06
VPS16Q9H269 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS16Q9H269 AC005972.2-201ENST00000604690 348 ntBASIC2.19□□□□□ -2.06
VPS16Q9H269 AL365222.1-201ENST00000614661 98 ntBASIC2.19□□□□□ -2.06
VPS16Q9H269 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.19□□□□□ -2.06
VPS16Q9H269 AL590808.1-201ENST00000618696 141 ntBASIC2.19□□□□□ -2.06
VPS16Q9H269 snoU2-30.2-201ENST00000362805 70 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 RNY1P11-201ENST00000363759 113 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 RNU6-643P-201ENST00000384018 107 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 SNORA20-201ENST00000384662 132 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 RNA5SP450-201ENST00000411206 102 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 MTND4LP9-201ENST00000427694 174 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 RNU7-197P-201ENST00000458836 62 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 AC015720.1-201ENST00000565251 277 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 MIR338-201ENST00000636369 67 ntBASIC2.18□□□□□ -2.06
VPS16Q9H269 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS16Q9H269 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS16Q9H269 Y_RNA.337-201ENST00000365312 102 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 SNORA22C-201ENST00000384614 134 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 MIR515-2-201ENST00000384883 83 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 MIR515-1-201ENST00000384884 83 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 SNORA3.2-201ENST00000408221 125 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 MTATP6P29-201ENST00000415057 132 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 HMGN2P34-201ENST00000437647 269 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.17□□□□□ -2.06
VPS16Q9H269 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS16Q9H269 RPL23AP54-201ENST00000495129 419 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.17□□□□□ -2.06
VPS16Q9H269 RNU6-479P-201ENST00000516348 105 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 MIR1273D-201ENST00000577266 86 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 AL021707.8-201ENST00000609428 183 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 CENPCP1-201ENST00000533085 2578 ntBASIC2.17□□□□□ -2.06
VPS16Q9H269 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS16Q9H269 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS16Q9H269 RNU6-1290P-201ENST00000362957 109 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 RNU6-674P-201ENST00000363831 107 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 Y_RNA.218-201ENST00000364218 104 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.16□□□□□ -2.06
VPS16Q9H269 RNU6-768P-201ENST00000384683 107 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 RNU6-376P-201ENST00000384731 106 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 RNU6-1168P-201ENST00000390831 104 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 CST2P1-201ENST00000425770 87 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS16Q9H269 RNU6-437P-201ENST00000459408 95 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 YWHAEP4-201ENST00000505390 198 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 RNU7-116P-201ENST00000516940 62 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 AC064859.1-201ENST00000624741 174 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
VPS16Q9H269 AC008555.8-201ENST00000623602 2168 ntBASIC2.16□□□□□ -2.06
VPS16Q9H269 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.16□□□□□ -2.06
VPS16Q9H269 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
VPS16Q9H269 RNU6-862P-201ENST00000362804 105 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RNU1-22P-201ENST00000363334 158 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 SNORD45.3-201ENST00000363836 72 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RNU6-728P-201ENST00000365375 104 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RNU6-136P-201ENST00000384663 107 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RNU6-417P-201ENST00000384712 107 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 SNORA40-201ENST00000388090 126 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VPS16Q9H269 SNORA48.1-201ENST00000390879 135 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RNU6-1154P-201ENST00000391001 104 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 AL117342.1-201ENST00000404861 406 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RN7SKP223-201ENST00000410582 62 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RNU6-735P-201ENST00000410612 107 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RNU4-43P-201ENST00000410628 137 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 Y_RNA.622-201ENST00000411091 108 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RN7SKP101-201ENST00000411376 320 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RPL30P13-201ENST00000418873 348 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS16Q9H269 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VPS16Q9H269 SNRPGP8-201ENST00000454064 226 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RNA5SP233-201ENST00000459153 113 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 RPS27P22-201ENST00000478056 241 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 AC112693.2-201ENST00000556538 232 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 AL929325.1-201ENST00000603096 117 ntBASIC2.15□□□□□ -2.07
VPS16Q9H269 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS16Q9H269 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS16Q9H269 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
VPS16Q9H269 RNU1-96P-201ENST00000364163 162 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 Y_RNA.420-201ENST00000384043 110 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 MIR513C-201ENST00000401352 84 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 RNA5SP425-201ENST00000410336 112 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 RNA5SP501-201ENST00000410990 112 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VPS16Q9H269 AC092991.1-201ENST00000477176 376 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 AC097462.1-201ENST00000514125 324 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 RNU6-313P-201ENST00000516317 112 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 RNU6-62P-201ENST00000516526 102 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 RNU6-971P-201ENST00000516920 106 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 AC022513.1-201ENST00000624512 117 ntBASIC2.14□□□□□ -2.07
VPS16Q9H269 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms