Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 AC023141.4-201ENST00000412031 328 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 AL035398.1-201ENST00000430869 322 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 RNU6-498P-201ENST00000459468 107 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 AC112771.1-201ENST00000463581 102 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 RNA5SP356-201ENST00000515972 94 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 AC004812.1-201ENST00000540773 146 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 MIR3162-201ENST00000581818 82 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 AC096720.1-201ENST00000604441 183 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 U6.98-201ENST00000637157 84 ntBASIC3.73□□□□□ -1.81
TRIM47Q96LD4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM47Q96LD4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
TRIM47Q96LD4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM47Q96LD4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM47Q96LD4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM47Q96LD4 MIR802-201ENST00000390235 94 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 RNA5SP144-201ENST00000410846 116 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 ARF4P2-201ENST00000430209 526 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 AC099677.2-201ENST00000436385 175 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 AC233266.1-201ENST00000454518 96 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 RNU7-80P-201ENST00000459562 61 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 AC091544.4-201ENST00000555268 342 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 AC002984.1-201ENST00000591692 448 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM47Q96LD4 AC242852.1-201ENST00000612151 96 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 AC244015.1-201ENST00000622301 99 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 AC091152.2-201ENST00000591628 2569 ntBASIC3.72□□□□□ -1.81
TRIM47Q96LD4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM47Q96LD4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM47Q96LD4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM47Q96LD4 RNU6-987P-201ENST00000384759 104 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TRIM47Q96LD4 RN7SL442P-201ENST00000473804 320 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 RPL30P14-201ENST00000482744 348 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 SNORA18.7-201ENST00000516910 131 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM47Q96LD4 UBL5P2-201ENST00000583788 219 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 AC103810.7-201ENST00000607821 91 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 AL110115.1-201ENST00000614396 364 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.71□□□□□ -1.82
TRIM47Q96LD4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
TRIM47Q96LD4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM47Q96LD4 AC093831.2-201ENST00000624393 3427 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 RNU1-70P-201ENST00000362618 164 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 SNORD31B-201ENST00000364977 69 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 SNORA7.4-201ENST00000384249 137 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 RN7SKP200-201ENST00000410564 320 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 AL445646.1-201ENST00000431784 216 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 RN7SL330P-201ENST00000469709 307 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 MIR2682-201ENST00000580305 110 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
TRIM47Q96LD4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM47Q96LD4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM47Q96LD4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TRIM47Q96LD4 MIR126-201ENST00000362291 85 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 Y_RNA.547-201ENST00000384654 119 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 AL022718.1-201ENST00000412004 84 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM47Q96LD4 AC093259.1-201ENST00000509755 300 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 AC093729.1-201ENST00000513074 128 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 GTF3AP2-201ENST00000557014 266 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 AC078899.2-201ENST00000595282 212 ntBASIC3.69□□□□□ -1.82
TRIM47Q96LD4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM47Q96LD4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM47Q96LD4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM47Q96LD4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TRIM47Q96LD4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM47Q96LD4 RNU6-234P-201ENST00000365229 104 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 SNORA54-201ENST00000384281 123 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 MIR1294-201ENST00000408503 142 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 RNU4-37P-201ENST00000410214 84 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 Y_RNA.714-201ENST00000517065 90 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 MIR376B-201ENST00000614515 100 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 Y_RNA.788-201ENST00000622394 112 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 AL512310.12-203ENST00000640543 90 ntBASIC3.68□□□□□ -1.82
TRIM47Q96LD4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
TRIM47Q96LD4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TRIM47Q96LD4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM47Q96LD4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TRIM47Q96LD4 AC005336.3-201ENST00000623833 2679 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 RNU6-315P-201ENST00000362666 107 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 SNORA71.1-201ENST00000364523 117 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 MIR1265-201ENST00000408444 86 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 SNX2P2-201ENST00000424553 323 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 SNORA64.4-201ENST00000516632 81 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 AC104027.1-201ENST00000521887 300 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 AP003484.1-201ENST00000530974 250 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 MIR4474-201ENST00000579189 78 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 AC006441.5-201ENST00000612680 209 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM47Q96LD4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.67□□□□□ -1.82
TRIM47Q96LD4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM47Q96LD4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM47Q96LD4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms