Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PHTF2Q8N3S3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PHTF2Q8N3S3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
PHTF2Q8N3S3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
PHTF2Q8N3S3 MIR422A-201ENST00000362286 90 ntBASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 RNU6-424P-201ENST00000384367 105 ntBASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 RN7SKP220-201ENST00000410611 288 ntBASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 RPL39P34-201ENST00000477141 156 ntBASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PHTF2Q8N3S3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 RNU6-1019P-201ENST00000364424 107 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 Y_RNA.298-201ENST00000364960 107 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 Y_RNA.323-201ENST00000365157 109 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 RNU6-950P-201ENST00000384651 107 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 RNA5SP109-201ENST00000391010 116 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 STAG3L5P-204ENST00000443759 179 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 SUMO2P16-201ENST00000519475 264 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 MIR3126-201ENST00000577443 74 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 AC069114.2-201ENST00000604699 304 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 AL033523.1-201ENST00000605153 153 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 MIR8054-201ENST00000620877 86 ntBASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHTF2Q8N3S3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
PHTF2Q8N3S3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 AL596211.1-201ENST00000569873 2277 ntBASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 Y_RNA.328-201ENST00000365208 113 ntBASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 SNORA54-201ENST00000384281 123 ntBASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 SNORA44-201ENST00000384584 132 ntBASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 Y_RNA.544-201ENST00000384650 113 ntBASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 AC073476.4-201ENST00000628409 72 ntBASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.27□□□□□ -1.89
PHTF2Q8N3S3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 RNU1-58P-201ENST00000362413 163 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 Y_RNA.362-201ENST00000365518 110 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 RN7SKP200-201ENST00000410564 320 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 AC114811.1-201ENST00000507207 168 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 AC008885.1-201ENST00000514930 301 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 RNU6-970P-201ENST00000516312 107 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 SNORA40.13-201ENST00000516379 120 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 MIR4305-201ENST00000583252 102 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 UBL5P2-201ENST00000583788 219 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 AC027279.3-201ENST00000625055 122 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.26□□□□□ -1.89
PHTF2Q8N3S3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 AC093010.3-201ENST00000570269 15214 ntBASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 SNORA80A-201ENST00000363922 136 ntBASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 RNU1-91P-201ENST00000364746 163 ntBASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 AC104389.3-201ENST00000445629 235 ntBASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 MIR3683-201ENST00000580847 82 ntBASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 MIR3163-201ENST00000581592 73 ntBASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 AP001318.4-201ENST00000616637 121 ntBASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 AL035425.3-201ENST00000564206 4996 ntBASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PHTF2Q8N3S3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 MIR302B-201ENST00000362188 73 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 MIR342-201ENST00000362212 99 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 AL034345.1-201ENST00000407768 123 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 RNU6-938P-201ENST00000411285 103 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 AC092427.1-202ENST00000430569 476 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 AL035398.1-201ENST00000430869 322 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 AL606517.2-201ENST00000442855 241 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 AC245166.1-201ENST00000521012 253 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 AC068339.1-201ENST00000526965 141 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 AC084364.2-201ENST00000546924 395 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 MIR5009-201ENST00000578736 100 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 uc_338.25-201ENST00000613756 156 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 AL035470.1-201ENST00000622571 220 ntBASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHTF2Q8N3S3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PHTF2Q8N3S3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PHTF2Q8N3S3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PHTF2Q8N3S3 SNORA48.8-201ENST00000391324 134 ntBASIC3.23□□□□□ -1.89
PHTF2Q8N3S3 AC107297.1-201ENST00000459991 176 ntBASIC3.23□□□□□ -1.89
PHTF2Q8N3S3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms