Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC136628.3-201ENST00000521868 290 ntBASIC2.19□□□□□ -2.06
KRT78Q8N1N4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.19□□□□□ -2.06
KRT78Q8N1N4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.19□□□□□ -2.06
KRT78Q8N1N4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
KRT78Q8N1N4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRT78Q8N1N4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRT78Q8N1N4 RNU6-112P-201ENST00000363599 104 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 RNU6-153P-201ENST00000364422 104 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 Y_RNA.420-201ENST00000384043 110 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 RNU6-136P-201ENST00000384663 107 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 SNORA8.3-201ENST00000384679 139 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 AC006461.1-201ENST00000412637 326 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 AC245047.4-201ENST00000433189 144 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 HSPE1P13-201ENST00000451143 297 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.18□□□□□ -2.06
KRT78Q8N1N4 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 AC109810.1-201ENST00000534066 224 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 MIR4299-201ENST00000577899 72 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 MIR4672-201ENST00000583126 81 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 AL078604.3-201ENST00000615580 211 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.18□□□□□ -2.06
KRT78Q8N1N4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRT78Q8N1N4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRT78Q8N1N4 RNU6-199P-201ENST00000362954 107 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 RNU6-103P-201ENST00000363686 107 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 MIR562-201ENST00000384894 95 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 MT-TT-201ENST00000387460 66 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 RNA5SP100-201ENST00000410903 110 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 RNA5SP59-201ENST00000410922 110 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.17□□□□□ -2.06
KRT78Q8N1N4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.17□□□□□ -2.06
KRT78Q8N1N4 AC245047.8-201ENST00000456455 284 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.17□□□□□ -2.06
KRT78Q8N1N4 RNU6-63P-201ENST00000516690 95 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 RNA5SP481-201ENST00000516814 122 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.17□□□□□ -2.06
KRT78Q8N1N4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 AC018630.2-201ENST00000534866 2403 ntBASIC2.17□□□□□ -2.06
KRT78Q8N1N4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.17□□□□□ -2.06
KRT78Q8N1N4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRT78Q8N1N4 Y_RNA.172-201ENST00000363765 102 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 Y_RNA.337-201ENST00000365312 102 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 Y_RNA.341-201ENST00000365341 102 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 RNU6-969P-201ENST00000383900 105 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 SNORA72.4-201ENST00000384174 132 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 RNU6-950P-201ENST00000384651 107 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 SNORA67.4-201ENST00000384688 142 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRT78Q8N1N4 SNORD37.2-201ENST00000391075 66 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 RPS26P45-201ENST00000471748 340 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 RPS27P21-201ENST00000486977 252 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 RNU6-561P-201ENST00000516222 102 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 AC112693.2-201ENST00000556538 232 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
KRT78Q8N1N4 Y_RNA.802-201ENST00000614892 130 ntBASIC2.16□□□□□ -2.06
KRT78Q8N1N4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
KRT78Q8N1N4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRT78Q8N1N4 RNA5SP289-201ENST00000362332 137 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 MIR539-201ENST00000365690 78 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 RNU6-80P-201ENST00000384195 107 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 Y_RNA.525-201ENST00000384570 113 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 RNA5SP109-201ENST00000391010 116 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 RNU6-460P-201ENST00000391158 108 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 RNU4-53P-201ENST00000410828 140 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 AC245047.3-201ENST00000429428 127 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 AL121914.1-201ENST00000450188 156 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 RNU7-197P-201ENST00000458836 62 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 RPL23AP63-201ENST00000498752 471 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 SNORA31.17-201ENST00000516953 127 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 AC011603.4-201ENST00000611325 277 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 MIR6079-201ENST00000635807 62 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 U6.108-201ENST00000637764 58 ntBASIC2.15□□□□□ -2.07
KRT78Q8N1N4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.14□□□□□ -2.07
KRT78Q8N1N4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRT78Q8N1N4 SNORA63.4-201ENST00000362763 126 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 RNY1P11-201ENST00000363759 113 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 SNORA63D-201ENST00000364359 132 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 MIR520G-201ENST00000385064 90 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 MIR221-201ENST00000385135 110 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 HSPE1P21-201ENST00000438283 308 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 RNU7-141P-201ENST00000459304 62 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 RNU7-34P-201ENST00000459394 64 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 RNU4-57P-201ENST00000515980 135 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 RNU7-128P-201ENST00000517247 62 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
KRT78Q8N1N4 AL627230.6-201ENST00000611129 280 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms