Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-865P-201ENST00000364772 107 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 SNORD114-29-201ENST00000364819 70 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 RNU6-224P-201ENST00000384055 107 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 SNORA40.2-201ENST00000390847 128 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 RNU6-298P-201ENST00000390888 96 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 AP000533.3-201ENST00000447704 118 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 RNU6-1332P-201ENST00000516666 104 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 RNA5SP33-201ENST00000516687 98 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 RNU6-175P-201ENST00000516896 107 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 AC024405.2-202ENST00000532731 184 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 AL356055.1-201ENST00000602528 446 ntBASIC-2.11□□□□□ -2.75
LINC00643Q86TS7 Y_RNA.12-201ENST00000362393 112 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 SNORA63.5-201ENST00000363548 123 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 RNU6-431P-201ENST00000383874 107 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 Y_RNA.517-201ENST00000384551 106 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 SNRPGP14-201ENST00000435400 219 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 RNU7-67P-201ENST00000459003 62 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 RNU6-437P-201ENST00000459408 95 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 SNORA25.10-201ENST00000515926 124 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 AC069113.1-201ENST00000517763 267 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 AL136370.1-201ENST00000608166 691 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 MIR382-201ENST00000637119 76 ntBASIC-2.12□□□□□ -2.75
LINC00643Q86TS7 SNORD114-15-201ENST00000364687 72 ntBASIC-2.13□□□□□ -2.75
LINC00643Q86TS7 RNU6-442P-201ENST00000383968 104 ntBASIC-2.13□□□□□ -2.75
LINC00643Q86TS7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-2.13□□□□□ -2.75
LINC00643Q86TS7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-2.13□□□□□ -2.75
LINC00643Q86TS7 RNU6-1194P-201ENST00000516208 104 ntBASIC-2.13□□□□□ -2.75
LINC00643Q86TS7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.14□□□□□ -2.75
LINC00643Q86TS7 U8.15-201ENST00000390947 134 ntBASIC-2.14□□□□□ -2.75
LINC00643Q86TS7 USP9YP12-201ENST00000450481 570 ntBASIC-2.14□□□□□ -2.75
LINC00643Q86TS7 Y_RNA.637-201ENST00000459424 114 ntBASIC-2.14□□□□□ -2.75
LINC00643Q86TS7 MTCO2P29-201ENST00000465212 189 ntBASIC-2.14□□□□□ -2.75
LINC00643Q86TS7 RNU6-1198P-201ENST00000516904 67 ntBASIC-2.14□□□□□ -2.75
LINC00643Q86TS7 MIR4307-201ENST00000582802 84 ntBASIC-2.14□□□□□ -2.75
LINC00643Q86TS7 uc_338.10-201ENST00000621872 182 ntBASIC-2.14□□□□□ -2.75
LINC00643Q86TS7 MTND5P17-201ENST00000418405 1603 ntBASIC-2.15□□□□□ -2.75
LINC00643Q86TS7 MIR147A-201ENST00000385079 72 ntBASIC-2.15□□□□□ -2.75
LINC00643Q86TS7 RNA5SP480-201ENST00000516840 109 ntBASIC-2.15□□□□□ -2.75
LINC00643Q86TS7 snoU83B.1-201ENST00000517136 88 ntBASIC-2.15□□□□□ -2.75
LINC00643Q86TS7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.15□□□□□ -2.75
LINC00643Q86TS7 AP000676.1-201ENST00000533307 52 ntBASIC-2.15□□□□□ -2.75
LINC00643Q86TS7 MTND1P24-201ENST00000552175 861 ntBASIC-2.15□□□□□ -2.75
LINC00643Q86TS7 MIR4473-201ENST00000583731 91 ntBASIC-2.15□□□□□ -2.75
LINC00643Q86TS7 RNU6-1287P-201ENST00000362914 107 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 RNU6-268P-201ENST00000364174 107 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 MIR539-201ENST00000365690 78 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 RNU6-1036P-201ENST00000383959 104 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 RNU6-1157P-201ENST00000384456 106 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 RNU6-1060P-201ENST00000384664 107 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 RNU6-913P-201ENST00000390913 95 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 HMGN1P33-201ENST00000432945 451 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 AC119618.1-201ENST00000434191 222 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 SCARNA1-201ENST00000517138 166 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 AC022616.4-201ENST00000522985 181 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 RNU6-85P-201ENST00000605989 107 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 AC072046.2-201ENST00000618366 268 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 AC097460.3-201ENST00000623099 442 ntBASIC-2.16□□□□□ -2.76
LINC00643Q86TS7 Y_RNA.179-201ENST00000363844 90 ntBASIC-2.17□□□□□ -2.76
LINC00643Q86TS7 Y_RNA.283-201ENST00000364798 112 ntBASIC-2.17□□□□□ -2.76
LINC00643Q86TS7 RNU6-393P-201ENST00000384475 107 ntBASIC-2.17□□□□□ -2.76
LINC00643Q86TS7 ERHP2-201ENST00000402323 299 ntBASIC-2.17□□□□□ -2.76
LINC00643Q86TS7 RPL30P10-201ENST00000488148 337 ntBASIC-2.17□□□□□ -2.76
LINC00643Q86TS7 RNU2-69P-201ENST00000516061 100 ntBASIC-2.17□□□□□ -2.76
LINC00643Q86TS7 AL512506.1-201ENST00000613918 449 ntBASIC-2.17□□□□□ -2.76
LINC00643Q86TS7 SNORD115-2-201ENST00000362842 82 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 RNU6-560P-201ENST00000364007 108 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 RNU6-702P-201ENST00000364982 107 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 SNORA20.2-201ENST00000383922 131 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 Y_RNA.439-201ENST00000384119 94 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 RNU6-434P-201ENST00000384376 107 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 Y_RNA.568-201ENST00000384742 113 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 MIR625-201ENST00000385047 85 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 MIR153-2-201ENST00000385225 87 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 Y_RNA.578-201ENST00000390903 88 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 RNU2-29P-201ENST00000410423 189 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 RNA5SP475-201ENST00000410568 110 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 snoU13.13-201ENST00000458842 104 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 RNU6-958P-201ENST00000516995 106 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 MIR3115-201ENST00000577915 68 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 AC004223.4-201ENST00000612426 332 ntBASIC-2.18□□□□□ -2.76
LINC00643Q86TS7 RNA5SP403-201ENST00000363598 108 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 RNU4-1-201ENST00000363925 141 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 RPL30P16-201ENST00000419341 429 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 USP9YP30-201ENST00000430729 455 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 RPL22P17-201ENST00000438729 315 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 U8.19-201ENST00000459095 133 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 U8.22-201ENST00000459141 133 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 MTATP6P15-201ENST00000527233 835 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 U6.114-201ENST00000636407 96 ntBASIC-2.19□□□□□ -2.76
LINC00643Q86TS7 RNU6-433P-201ENST00000363216 104 ntBASIC-2.2□□□□□ -2.76
LINC00643Q86TS7 RNU5F-3P-201ENST00000363767 117 ntBASIC-2.2□□□□□ -2.76
LINC00643Q86TS7 Y_RNA.319-201ENST00000365138 92 ntBASIC-2.2□□□□□ -2.76
LINC00643Q86TS7 RNU6-1250P-201ENST00000391218 107 ntBASIC-2.2□□□□□ -2.76
LINC00643Q86TS7 AL603914.1-201ENST00000401964 204 ntBASIC-2.2□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 382.5 ms