Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC011476.5-201ENST00000615594 130 ntBASIC1.19□□□□□ -2.22
PTCH1Q13635 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.19□□□□□ -2.22
PTCH1Q13635 Y_RNA.152-201ENST00000363578 100 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 Y_RNA.183-201ENST00000363882 113 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 Y_RNA.214-201ENST00000364201 112 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 RNU6-20P-201ENST00000384106 107 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 Y_RNA.439-201ENST00000384119 94 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 MIR1185-2-201ENST00000408687 86 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 ELOCP20-201ENST00000422460 345 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 MTND5P22-201ENST00000458380 195 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 RNU6-625P-201ENST00000459412 107 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 RNU6-897P-201ENST00000517135 105 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 AL512310.8-201ENST00000550183 120 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 snoZ196.1-201ENST00000625269 89 ntBASIC1.18□□□□□ -2.22
PTCH1Q13635 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PTCH1Q13635 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PTCH1Q13635 RNU6-1123P-201ENST00000362347 106 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 Y_RNA.143-201ENST00000363520 106 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RNU6-770P-201ENST00000363929 105 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 Y_RNA.276-201ENST00000364732 109 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RNU6-1310P-201ENST00000384153 107 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 SNORD63-201ENST00000384262 68 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 Y_RNA.462-201ENST00000384268 102 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RNU6-1109P-201ENST00000391187 107 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RNA5SP467-201ENST00000391274 118 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RNA5SP475-201ENST00000410568 110 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RAB28P5-201ENST00000427490 651 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 AC010655.3-201ENST00000478818 450 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RNU6-107P-201ENST00000516643 102 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RN7SKP88-201ENST00000516847 250 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 AC131281.1-201ENST00000522984 164 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 AP002001.1-203ENST00000534002 267 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 RAC1P9-201ENST00000604990 392 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 7SK.8-201ENST00000612110 250 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 7SK.11-201ENST00000615477 250 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 AC004467.1-201ENST00000615678 330 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 7SK.13-201ENST00000622040 250 ntBASIC1.17□□□□□ -2.22
PTCH1Q13635 Y_RNA.133-201ENST00000363428 110 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 Y_RNA.210-201ENST00000364161 110 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 RNU6-454P-201ENST00000364292 107 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 Y_RNA.230-201ENST00000364348 109 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 Y_RNA.287-201ENST00000364853 94 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 RNU6-1240P-201ENST00000365155 104 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 RNU6-716P-201ENST00000365621 103 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 RNU6-1264P-201ENST00000383891 107 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 Y_RNA.459-201ENST00000384251 102 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 SNORD115-46-201ENST00000390982 71 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 MIR548F4-201ENST00000408515 105 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 RNU5A-5P-201ENST00000411054 116 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.16□□□□□ -2.22
PTCH1Q13635 AL358176.2-201ENST00000425769 204 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 PGBD4P5-201ENST00000445958 426 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 RNU6-221P-201ENST00000459541 99 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 RNU6-1046P-201ENST00000516538 107 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.16□□□□□ -2.22
PTCH1Q13635 AL117187.1-201ENST00000555482 181 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 AC055872.1-201ENST00000570978 278 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 MIR4423-201ENST00000580922 80 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 MIR3674-201ENST00000636576 68 ntBASIC1.16□□□□□ -2.22
PTCH1Q13635 SNORA33-201ENST00000363664 130 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 VTRNA1-3-201ENST00000365645 89 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
PTCH1Q13635 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.15□□□□□ -2.22
PTCH1Q13635 TOMM22P2-201ENST00000430735 237 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 AC005002.2-201ENST00000438228 269 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.15□□□□□ -2.22
PTCH1Q13635 MRPS35P2-201ENST00000508242 191 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 RNU6-1143P-201ENST00000516125 104 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 RNU6-397P-201ENST00000516226 104 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 AC136932.1-201ENST00000574771 208 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 AC005176.2-201ENST00000596933 147 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 AC022441.3-201ENST00000605737 136 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 AL359075.3-201ENST00000613288 217 ntBASIC1.15□□□□□ -2.22
PTCH1Q13635 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
PTCH1Q13635 Y_RNA.26-201ENST00000362539 101 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 Y_RNA.101-201ENST00000363154 102 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 Y_RNA.105-201ENST00000363182 111 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 Y_RNA.274-201ENST00000364714 101 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 RNU6-806P-201ENST00000365147 105 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 RNU6-937P-201ENST00000384325 106 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 Y_RNA.570-201ENST00000384750 101 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 RNA5SP109-201ENST00000391010 116 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 RNA5SP193-201ENST00000410353 107 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 RNU6-121P-201ENST00000410525 99 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 RNU6-1199P-201ENST00000411249 104 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.15□□□□□ -2.23
PTCH1Q13635 AL731563.1-201ENST00000442202 214 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 LINC01399-202ENST00000458450 244 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 MTATP8P1-201ENST00000467115 207 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 RNY3P15-201ENST00000516297 97 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 AC025647.1-201ENST00000517879 253 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 SUMO2P16-201ENST00000519475 264 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 AC133485.1-201ENST00000567176 124 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 AC138907.6-201ENST00000568401 126 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 MIR4711-201ENST00000578274 70 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 MIR3664-201ENST00000579074 99 ntBASIC1.15□□□□□ -2.23
PTCH1Q13635 AL929325.1-201ENST00000603096 117 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms