Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNU6-151P-201ENST00000364158 107 ntBASIC1.92□□□□□ -2.1
LTBQ06643 RNU6-704P-201ENST00000364162 103 ntBASIC1.92□□□□□ -2.1
LTBQ06643 RNU1-96P-201ENST00000364163 162 ntBASIC1.92□□□□□ -2.1
LTBQ06643 SRIP3-201ENST00000413200 219 ntBASIC1.92□□□□□ -2.1
LTBQ06643 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LTBQ06643 AC009238.1-201ENST00000442165 424 ntBASIC1.92□□□□□ -2.1
LTBQ06643 AC009237.6-201ENST00000446969 424 ntBASIC1.92□□□□□ -2.1
LTBQ06643 AL121914.1-201ENST00000450188 156 ntBASIC1.92□□□□□ -2.1
LTBQ06643 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
LTBQ06643 RNA5SP82-201ENST00000516707 92 ntBASIC1.92□□□□□ -2.1
LTBQ06643 MIR6895-201ENST00000613497 78 ntBASIC1.92□□□□□ -2.1
LTBQ06643 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
LTBQ06643 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LTBQ06643 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
LTBQ06643 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LTBQ06643 snoU2-30.2-201ENST00000362805 70 ntBASIC1.91□□□□□ -2.1
LTBQ06643 SNORA3A-201ENST00000364113 130 ntBASIC1.91□□□□□ -2.1
LTBQ06643 Y_RNA.400-201ENST00000383963 111 ntBASIC1.91□□□□□ -2.1
LTBQ06643 SNORA72-201ENST00000384339 132 ntBASIC1.91□□□□□ -2.1
LTBQ06643 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
LTBQ06643 MIR15B-201ENST00000385045 98 ntBASIC1.91□□□□□ -2.1
LTBQ06643 RNU6-1228P-201ENST00000391014 107 ntBASIC1.91□□□□□ -2.1
LTBQ06643 RNU6-131P-201ENST00000391144 107 ntBASIC1.91□□□□□ -2.1
LTBQ06643 RNA5SP467-201ENST00000391274 118 ntBASIC1.91□□□□□ -2.1
LTBQ06643 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
LTBQ06643 RNU6-321P-201ENST00000410912 106 ntBASIC1.91□□□□□ -2.1
LTBQ06643 AL606753.1-201ENST00000427435 87 ntBASIC1.91□□□□□ -2.1
LTBQ06643 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.91□□□□□ -2.1
LTBQ06643 TMSB4XP3-201ENST00000445144 114 ntBASIC1.91□□□□□ -2.1
LTBQ06643 AC245102.2-201ENST00000448956 180 ntBASIC1.91□□□□□ -2.1
LTBQ06643 RNA5SP272-201ENST00000516095 111 ntBASIC1.91□□□□□ -2.1
LTBQ06643 RNU7-128P-201ENST00000517247 62 ntBASIC1.91□□□□□ -2.1
LTBQ06643 CYCSP26-201ENST00000534107 320 ntBASIC1.91□□□□□ -2.1
LTBQ06643 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.91□□□□□ -2.1
LTBQ06643 Y_RNA.778-201ENST00000620203 90 ntBASIC1.91□□□□□ -2.1
LTBQ06643 MTND1P7-201ENST00000632801 297 ntBASIC1.91□□□□□ -2.1
LTBQ06643 MIR203B-201ENST00000636080 86 ntBASIC1.91□□□□□ -2.1
LTBQ06643 MIR3658-201ENST00000636291 56 ntBASIC1.91□□□□□ -2.1
LTBQ06643 AC132825.6-201ENST00000638861 357 ntBASIC1.91□□□□□ -2.1
LTBQ06643 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
LTBQ06643 WWP1P1-201ENST00000466609 2769 ntBASIC1.91□□□□□ -2.1
LTBQ06643 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
LTBQ06643 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
LTBQ06643 MIR378A-201ENST00000362177 66 ntBASIC1.9□□□□□ -2.11
LTBQ06643 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
LTBQ06643 Y_RNA.215-201ENST00000364204 112 ntBASIC1.9□□□□□ -2.11
LTBQ06643 RNU4-41P-201ENST00000364426 143 ntBASIC1.9□□□□□ -2.11
LTBQ06643 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
LTBQ06643 SNORD50.2-201ENST00000365465 70 ntBASIC1.9□□□□□ -2.11
LTBQ06643 RNU6-376P-201ENST00000384731 106 ntBASIC1.9□□□□□ -2.11
LTBQ06643 Y_RNA.587-201ENST00000391210 103 ntBASIC1.9□□□□□ -2.11
LTBQ06643 RNU6-1186P-201ENST00000410429 97 ntBASIC1.9□□□□□ -2.11
LTBQ06643 Y_RNA.622-201ENST00000411091 108 ntBASIC1.9□□□□□ -2.11
LTBQ06643 AC006461.1-201ENST00000412637 326 ntBASIC1.9□□□□□ -2.11
LTBQ06643 CYCSP49-201ENST00000420810 319 ntBASIC1.9□□□□□ -2.11
LTBQ06643 AC010154.1-201ENST00000425857 269 ntBASIC1.9□□□□□ -2.11
LTBQ06643 SNRPGP8-201ENST00000454064 226 ntBASIC1.9□□□□□ -2.11
LTBQ06643 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
LTBQ06643 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
LTBQ06643 AC073413.2-201ENST00000604332 360 ntBASIC1.9□□□□□ -2.11
LTBQ06643 AC022202.1-201ENST00000613515 211 ntBASIC1.9□□□□□ -2.11
LTBQ06643 MIR6132-201ENST00000622083 109 ntBASIC1.9□□□□□ -2.11
LTBQ06643 MIR338-201ENST00000636369 67 ntBASIC1.9□□□□□ -2.11
LTBQ06643 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.9□□□□□ -2.11
LTBQ06643 U6.108-201ENST00000637764 58 ntBASIC1.9□□□□□ -2.11
LTBQ06643 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LTBQ06643 Y_RNA.99-201ENST00000363138 105 ntBASIC1.89□□□□□ -2.11
LTBQ06643 RNY1P10-201ENST00000363268 113 ntBASIC1.89□□□□□ -2.11
LTBQ06643 AL117342.1-201ENST00000404861 406 ntBASIC1.89□□□□□ -2.11
LTBQ06643 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
LTBQ06643 RN7SKP101-201ENST00000411376 320 ntBASIC1.89□□□□□ -2.11
LTBQ06643 AL021397.1-201ENST00000451806 248 ntBASIC1.89□□□□□ -2.11
LTBQ06643 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.89□□□□□ -2.11
LTBQ06643 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
LTBQ06643 IGLV3-17-201ENST00000519099 244 ntBASIC1.89□□□□□ -2.11
LTBQ06643 AC011604.1-201ENST00000545978 196 ntBASIC1.89□□□□□ -2.11
LTBQ06643 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.89□□□□□ -2.11
LTBQ06643 AL031274.2-201ENST00000599419 203 ntBASIC1.89□□□□□ -2.11
LTBQ06643 AL021707.8-201ENST00000609428 183 ntBASIC1.89□□□□□ -2.11
LTBQ06643 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.89□□□□□ -2.11
LTBQ06643 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LTBQ06643 ZNF702P-202ENST00000434269 1966 ntBASIC1.89□□□□□ -2.11
LTBQ06643 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
LTBQ06643 Y_RNA.203-201ENST00000364106 102 ntBASIC1.88□□□□□ -2.11
LTBQ06643 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
LTBQ06643 RNU6-643P-201ENST00000384018 107 ntBASIC1.88□□□□□ -2.11
LTBQ06643 Y_RNA.488-201ENST00000384403 102 ntBASIC1.88□□□□□ -2.11
LTBQ06643 Y_RNA.568-201ENST00000384742 113 ntBASIC1.88□□□□□ -2.11
LTBQ06643 SNORD23.1-201ENST00000408212 104 ntBASIC1.88□□□□□ -2.11
LTBQ06643 EDDM3CP-201ENST00000415977 425 ntBASIC1.88□□□□□ -2.11
LTBQ06643 AL353689.1-201ENST00000438895 199 ntBASIC1.88□□□□□ -2.11
LTBQ06643 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.88□□□□□ -2.11
LTBQ06643 AC107027.2-201ENST00000512197 115 ntBASIC1.88□□□□□ -2.11
LTBQ06643 RNU7-99P-201ENST00000516271 62 ntBASIC1.88□□□□□ -2.11
LTBQ06643 RNU6-1146P-201ENST00000516282 102 ntBASIC1.88□□□□□ -2.11
LTBQ06643 RNA5SP137-201ENST00000516833 135 ntBASIC1.88□□□□□ -2.11
LTBQ06643 RNU6-1096P-201ENST00000517089 102 ntBASIC1.88□□□□□ -2.11
LTBQ06643 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.88□□□□□ -2.11
LTBQ06643 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.88□□□□□ -2.11
LTBQ06643 AL049861.1-201ENST00000603130 150 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms