Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RN7SL601P-201ENST00000471221 293 ntBASIC3.59□□□□□ -1.83
USP46P62068 RN7SL442P-201ENST00000473804 320 ntBASIC3.59□□□□□ -1.83
USP46P62068 RNU6-998P-201ENST00000515894 101 ntBASIC3.59□□□□□ -1.83
USP46P62068 AC022254.1-201ENST00000567857 235 ntBASIC3.59□□□□□ -1.83
USP46P62068 MIR3200-201ENST00000580767 85 ntBASIC3.59□□□□□ -1.83
USP46P62068 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.59□□□□□ -1.83
USP46P62068 AC021613.1-201ENST00000623880 111 ntBASIC3.59□□□□□ -1.83
USP46P62068 AC064859.1-201ENST00000624741 174 ntBASIC3.59□□□□□ -1.83
USP46P62068 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
USP46P62068 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
USP46P62068 AC073346.2-201ENST00000624724 2058 ntBASIC3.58□□□□□ -1.84
USP46P62068 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.58□□□□□ -1.84
USP46P62068 Y_RNA.360-201ENST00000365512 102 ntBASIC3.58□□□□□ -1.84
USP46P62068 MIR577-201ENST00000385196 96 ntBASIC3.58□□□□□ -1.84
USP46P62068 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
USP46P62068 SNORA11.4-201ENST00000408823 129 ntBASIC3.58□□□□□ -1.84
USP46P62068 RN7SKP111-201ENST00000410349 271 ntBASIC3.58□□□□□ -1.84
USP46P62068 RNU7-96P-201ENST00000459535 64 ntBASIC3.58□□□□□ -1.84
USP46P62068 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
USP46P62068 AC091826.1-201ENST00000514065 313 ntBASIC3.58□□□□□ -1.84
USP46P62068 MIR4694-201ENST00000578534 80 ntBASIC3.58□□□□□ -1.84
USP46P62068 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.58□□□□□ -1.84
USP46P62068 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.58□□□□□ -1.84
USP46P62068 AC012531.4-201ENST00000616509 177 ntBASIC3.58□□□□□ -1.84
USP46P62068 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.58□□□□□ -1.84
USP46P62068 MIR8054-201ENST00000620877 86 ntBASIC3.58□□□□□ -1.84
USP46P62068 AC022149.2-201ENST00000621061 203 ntBASIC3.58□□□□□ -1.84
USP46P62068 AC095038.3-201ENST00000634439 195 ntBASIC3.58□□□□□ -1.84
USP46P62068 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP46P62068 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP46P62068 RNU6-363P-201ENST00000362895 105 ntBASIC3.57□□□□□ -1.84
USP46P62068 RNU6-832P-201ENST00000363319 107 ntBASIC3.57□□□□□ -1.84
USP46P62068 RNY1P1-201ENST00000364372 112 ntBASIC3.57□□□□□ -1.84
USP46P62068 RNU4-67P-201ENST00000364569 141 ntBASIC3.57□□□□□ -1.84
USP46P62068 Y_RNA.494-201ENST00000384432 111 ntBASIC3.57□□□□□ -1.84
USP46P62068 AC092185.1-201ENST00000491371 97 ntBASIC3.57□□□□□ -1.84
USP46P62068 RN7SL504P-201ENST00000494496 287 ntBASIC3.57□□□□□ -1.84
USP46P62068 RNU2-13P-201ENST00000515909 113 ntBASIC3.57□□□□□ -1.84
USP46P62068 ZNF861P-201ENST00000588126 639 ntBASIC3.57□□□□□ -1.84
USP46P62068 YPEL5P2-201ENST00000605553 359 ntBASIC3.57□□□□□ -1.84
USP46P62068 IGLL4P-201ENST00000614590 133 ntBASIC3.57□□□□□ -1.84
USP46P62068 U7.3-201ENST00000616123 62 ntBASIC3.57□□□□□ -1.84
USP46P62068 MIR3651-201ENST00000630427 90 ntBASIC3.57□□□□□ -1.84
USP46P62068 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
USP46P62068 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP46P62068 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.56□□□□□ -1.84
USP46P62068 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP46P62068 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP46P62068 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP46P62068 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP46P62068 RNU6-461P-201ENST00000364195 107 ntBASIC3.56□□□□□ -1.84
USP46P62068 MIR605-201ENST00000385078 83 ntBASIC3.56□□□□□ -1.84
USP46P62068 RPL23AP83-201ENST00000434984 473 ntBASIC3.56□□□□□ -1.84
USP46P62068 RNU2-11P-201ENST00000459191 187 ntBASIC3.56□□□□□ -1.84
USP46P62068 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
USP46P62068 RNU7-181P-201ENST00000517234 74 ntBASIC3.56□□□□□ -1.84
USP46P62068 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.56□□□□□ -1.84
USP46P62068 MIR3169-201ENST00000578032 83 ntBASIC3.56□□□□□ -1.84
USP46P62068 AC005000.2-201ENST00000605468 310 ntBASIC3.56□□□□□ -1.84
USP46P62068 MIR7112-201ENST00000616126 65 ntBASIC3.56□□□□□ -1.84
USP46P62068 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP46P62068 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.56□□□□□ -1.84
USP46P62068 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP46P62068 RNU6-170P-201ENST00000362832 104 ntBASIC3.55□□□□□ -1.84
USP46P62068 SNORD115-19-201ENST00000363098 82 ntBASIC3.55□□□□□ -1.84
USP46P62068 SNORD115-18-201ENST00000363293 82 ntBASIC3.55□□□□□ -1.84
USP46P62068 SNORD115-17-201ENST00000364612 82 ntBASIC3.55□□□□□ -1.84
USP46P62068 MIR491-201ENST00000384877 84 ntBASIC3.55□□□□□ -1.84
USP46P62068 SNORA26.7-201ENST00000391288 122 ntBASIC3.55□□□□□ -1.84
USP46P62068 RNA5SP293-201ENST00000410527 113 ntBASIC3.55□□□□□ -1.84
USP46P62068 SNORA7.5-201ENST00000410672 110 ntBASIC3.55□□□□□ -1.84
USP46P62068 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.55□□□□□ -1.84
USP46P62068 AC004941.2-201ENST00000427009 228 ntBASIC3.55□□□□□ -1.84
USP46P62068 RNU7-45P-201ENST00000459460 63 ntBASIC3.55□□□□□ -1.84
USP46P62068 AC022137.1-201ENST00000483735 151 ntBASIC3.55□□□□□ -1.84
USP46P62068 SNORA31.4-201ENST00000516049 129 ntBASIC3.55□□□□□ -1.84
USP46P62068 SNORA70.24-201ENST00000517233 118 ntBASIC3.55□□□□□ -1.84
USP46P62068 MIR5195-201ENST00000583555 115 ntBASIC3.55□□□□□ -1.84
USP46P62068 MIR4276-201ENST00000584832 70 ntBASIC3.55□□□□□ -1.84
USP46P62068 SNORA28-201ENST00000606769 126 ntBASIC3.55□□□□□ -1.84
USP46P62068 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.55□□□□□ -1.84
USP46P62068 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP46P62068 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP46P62068 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP46P62068 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
USP46P62068 SNORD115-34-201ENST00000362441 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-12-201ENST00000362583 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-29-201ENST00000362834 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-9-201ENST00000362912 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-21-201ENST00000362963 81 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-14-201ENST00000363090 81 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-13-201ENST00000363358 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-41-201ENST00000363608 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-11-201ENST00000363616 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-5-201ENST00000363633 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-39-201ENST00000363694 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-4-201ENST00000363810 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-16-201ENST00000363887 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-6-201ENST00000363942 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-42-201ENST00000364273 82 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms