Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-561P-201ENST00000516222 102 ntBASIC1.59□□□□□ -2.15
LMO4P61968 RNU7-121P-201ENST00000516604 62 ntBASIC1.59□□□□□ -2.15
LMO4P61968 MIR5688-201ENST00000580619 83 ntBASIC1.59□□□□□ -2.15
LMO4P61968 POLR3GP1-201ENST00000594073 261 ntBASIC1.59□□□□□ -2.15
LMO4P61968 AC005972.2-201ENST00000604690 348 ntBASIC1.59□□□□□ -2.15
LMO4P61968 AP001485.1-201ENST00000604799 199 ntBASIC1.59□□□□□ -2.15
LMO4P61968 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.59□□□□□ -2.15
LMO4P61968 Y_RNA.778-201ENST00000620203 90 ntBASIC1.59□□□□□ -2.15
LMO4P61968 AC006435.5-201ENST00000624486 112 ntBASIC1.59□□□□□ -2.15
LMO4P61968 MIR3658-201ENST00000636291 56 ntBASIC1.59□□□□□ -2.15
LMO4P61968 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
LMO4P61968 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LMO4P61968 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
LMO4P61968 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LMO4P61968 RNU1-58P-201ENST00000362413 163 ntBASIC1.58□□□□□ -2.16
LMO4P61968 RNU6-1240P-201ENST00000365155 104 ntBASIC1.58□□□□□ -2.16
LMO4P61968 RNU6-81P-201ENST00000365608 104 ntBASIC1.58□□□□□ -2.16
LMO4P61968 Y_RNA.488-201ENST00000384403 102 ntBASIC1.58□□□□□ -2.16
LMO4P61968 Y_RNA.568-201ENST00000384742 113 ntBASIC1.58□□□□□ -2.16
LMO4P61968 MIR15B-201ENST00000385045 98 ntBASIC1.58□□□□□ -2.16
LMO4P61968 MIR569-201ENST00000385228 96 ntBASIC1.58□□□□□ -2.16
LMO4P61968 AL606845.1-201ENST00000404881 255 ntBASIC1.58□□□□□ -2.16
LMO4P61968 RNA5SP511-201ENST00000410487 115 ntBASIC1.58□□□□□ -2.16
LMO4P61968 AL162725.1-201ENST00000435405 301 ntBASIC1.58□□□□□ -2.16
LMO4P61968 AL353689.1-201ENST00000438895 199 ntBASIC1.58□□□□□ -2.16
LMO4P61968 AL357134.1-201ENST00000445848 426 ntBASIC1.58□□□□□ -2.16
LMO4P61968 AL021397.1-201ENST00000451806 248 ntBASIC1.58□□□□□ -2.16
LMO4P61968 RPS27P22-201ENST00000478056 241 ntBASIC1.58□□□□□ -2.16
LMO4P61968 RPL23AP54-201ENST00000495129 419 ntBASIC1.58□□□□□ -2.16
LMO4P61968 AC107027.2-201ENST00000512197 115 ntBASIC1.58□□□□□ -2.16
LMO4P61968 RNA5SP272-201ENST00000516095 111 ntBASIC1.58□□□□□ -2.16
LMO4P61968 RNU6-426P-201ENST00000516464 97 ntBASIC1.58□□□□□ -2.16
LMO4P61968 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.58□□□□□ -2.16
LMO4P61968 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.58□□□□□ -2.16
LMO4P61968 AC015720.1-201ENST00000565251 277 ntBASIC1.58□□□□□ -2.16
LMO4P61968 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.58□□□□□ -2.16
LMO4P61968 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.58□□□□□ -2.16
LMO4P61968 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LMO4P61968 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
LMO4P61968 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.57□□□□□ -2.16
LMO4P61968 RNU6-23P-201ENST00000363283 107 ntBASIC1.57□□□□□ -2.16
LMO4P61968 RNU1-22P-201ENST00000363334 158 ntBASIC1.57□□□□□ -2.16
LMO4P61968 RNU6-1164P-201ENST00000364428 107 ntBASIC1.57□□□□□ -2.16
LMO4P61968 Y_RNA.291-201ENST00000364886 113 ntBASIC1.57□□□□□ -2.16
LMO4P61968 RNU4-11P-201ENST00000365287 132 ntBASIC1.57□□□□□ -2.16
LMO4P61968 Y_RNA.343-201ENST00000365354 112 ntBASIC1.57□□□□□ -2.16
LMO4P61968 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.57□□□□□ -2.16
LMO4P61968 Y_RNA.497-201ENST00000384447 98 ntBASIC1.57□□□□□ -2.16
LMO4P61968 MIR597-201ENST00000384968 97 ntBASIC1.57□□□□□ -2.16
LMO4P61968 MIR1283-2-201ENST00000408621 87 ntBASIC1.57□□□□□ -2.16
LMO4P61968 MIR1278-201ENST00000408753 81 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AL356379.1-201ENST00000414105 126 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AL158823.1-201ENST00000418441 478 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AC123900.1-201ENST00000420390 96 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.57□□□□□ -2.16
LMO4P61968 AL603825.1-201ENST00000438481 80 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AL121914.1-201ENST00000450188 156 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.57□□□□□ -2.16
LMO4P61968 RNA5SP233-201ENST00000459153 113 ntBASIC1.57□□□□□ -2.16
LMO4P61968 RNU6-437P-201ENST00000459408 95 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AC097462.1-201ENST00000514125 324 ntBASIC1.57□□□□□ -2.16
LMO4P61968 RNU7-116P-201ENST00000516940 62 ntBASIC1.57□□□□□ -2.16
LMO4P61968 RNU6-856P-201ENST00000516959 98 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.57□□□□□ -2.16
LMO4P61968 MIR4438-201ENST00000585271 93 ntBASIC1.57□□□□□ -2.16
LMO4P61968 AC002984.1-201ENST00000591692 448 ntBASIC1.57□□□□□ -2.16
LMO4P61968 CENPCP1-201ENST00000533085 2578 ntBASIC1.57□□□□□ -2.16
LMO4P61968 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
LMO4P61968 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LMO4P61968 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
LMO4P61968 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
LMO4P61968 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LMO4P61968 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
LMO4P61968 RNU1-17P-201ENST00000363022 152 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RNU6-674P-201ENST00000363831 107 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RNU6-643P-201ENST00000384018 107 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RNU6-136P-201ENST00000384663 107 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RNU6-1228P-201ENST00000391014 107 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
LMO4P61968 AC006461.1-201ENST00000412637 326 ntBASIC1.56□□□□□ -2.16
LMO4P61968 AC003989.2-201ENST00000440224 169 ntBASIC1.56□□□□□ -2.16
LMO4P61968 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.56□□□□□ -2.16
LMO4P61968 RPL23AP6-201ENST00000446637 472 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RPS4XP11-201ENST00000446897 772 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
LMO4P61968 MIR514B-201ENST00000516774 80 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RNU1-40P-201ENST00000516816 164 ntBASIC1.56□□□□□ -2.16
LMO4P61968 RNU1-97P-201ENST00000516872 164 ntBASIC1.56□□□□□ -2.16
LMO4P61968 DNAJC19P2-201ENST00000593340 302 ntBASIC1.56□□□□□ -2.16
LMO4P61968 AL021707.8-201ENST00000609428 183 ntBASIC1.56□□□□□ -2.16
LMO4P61968 U1.36-201ENST00000620684 176 ntBASIC1.56□□□□□ -2.16
LMO4P61968 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LMO4P61968 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LMO4P61968 RNU4-13P-201ENST00000364019 141 ntBASIC1.55□□□□□ -2.16
LMO4P61968 SNORA72-201ENST00000384339 132 ntBASIC1.55□□□□□ -2.16
LMO4P61968 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LMO4P61968 Y_RNA.586-201ENST00000391146 98 ntBASIC1.55□□□□□ -2.16
LMO4P61968 AC060773.1-201ENST00000421698 310 ntBASIC1.55□□□□□ -2.16
LMO4P61968 SNORA25.12-201ENST00000516202 82 ntBASIC1.55□□□□□ -2.16
LMO4P61968 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms