Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RNA5SP210-201ENST00000391034 120 ntBASIC2.25□□□□□ -2.05
PER3P56645 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.25□□□□□ -2.05
PER3P56645 AC245047.3-201ENST00000429428 127 ntBASIC2.25□□□□□ -2.05
PER3P56645 MTND2P29-201ENST00000438595 412 ntBASIC2.25□□□□□ -2.05
PER3P56645 AL121914.1-201ENST00000450188 156 ntBASIC2.25□□□□□ -2.05
PER3P56645 HMGN1P7-201ENST00000491722 313 ntBASIC2.25□□□□□ -2.05
PER3P56645 SNORA31.10-201ENST00000516482 106 ntBASIC2.25□□□□□ -2.05
PER3P56645 AP002004.2-201ENST00000531656 154 ntBASIC2.25□□□□□ -2.05
PER3P56645 SUB1P4-201ENST00000566062 339 ntBASIC2.25□□□□□ -2.05
PER3P56645 AL591926.4-201ENST00000616895 298 ntBASIC2.25□□□□□ -2.05
PER3P56645 AC005336.3-201ENST00000623833 2679 ntBASIC2.25□□□□□ -2.05
PER3P56645 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PER3P56645 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
PER3P56645 Y_RNA.8-201ENST00000362353 102 ntBASIC2.24□□□□□ -2.05
PER3P56645 SNORA63D-201ENST00000364359 132 ntBASIC2.24□□□□□ -2.05
PER3P56645 RNU6-1130P-201ENST00000365434 107 ntBASIC2.24□□□□□ -2.05
PER3P56645 Y_RNA.398-201ENST00000383952 99 ntBASIC2.24□□□□□ -2.05
PER3P56645 RNU6-484P-201ENST00000384016 107 ntBASIC2.24□□□□□ -2.05
PER3P56645 Y_RNA.506-201ENST00000384494 102 ntBASIC2.24□□□□□ -2.05
PER3P56645 MIR15B-201ENST00000385045 98 ntBASIC2.24□□□□□ -2.05
PER3P56645 Y_RNA.622-201ENST00000411091 108 ntBASIC2.24□□□□□ -2.05
PER3P56645 AL049830.1-201ENST00000468034 425 ntBASIC2.24□□□□□ -2.05
PER3P56645 AC005840.1-201ENST00000498412 377 ntBASIC2.24□□□□□ -2.05
PER3P56645 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
PER3P56645 IGLV3-17-201ENST00000519099 244 ntBASIC2.24□□□□□ -2.05
PER3P56645 uc_338.4-201ENST00000616635 176 ntBASIC2.24□□□□□ -2.05
PER3P56645 MIR6873-201ENST00000622788 63 ntBASIC2.24□□□□□ -2.05
PER3P56645 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.24□□□□□ -2.05
PER3P56645 AC131280.1-202ENST00000624067 4211 ntBASIC2.24□□□□□ -2.05
PER3P56645 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PER3P56645 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PER3P56645 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PER3P56645 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PER3P56645 SNORD45.3-201ENST00000363836 72 ntBASIC2.23□□□□□ -2.05
PER3P56645 RNU6-728P-201ENST00000365375 104 ntBASIC2.23□□□□□ -2.05
PER3P56645 RNU6-125P-201ENST00000384505 107 ntBASIC2.23□□□□□ -2.05
PER3P56645 SNORA12.1-201ENST00000390873 148 ntBASIC2.23□□□□□ -2.05
PER3P56645 Y_RNA.580-201ENST00000391004 95 ntBASIC2.23□□□□□ -2.05
PER3P56645 AL359511.1-201ENST00000402970 211 ntBASIC2.23□□□□□ -2.05
PER3P56645 RNU4-43P-201ENST00000410628 137 ntBASIC2.23□□□□□ -2.05
PER3P56645 SNRPGP10-201ENST00000432323 225 ntBASIC2.23□□□□□ -2.05
PER3P56645 RNU6-548P-201ENST00000517083 115 ntBASIC2.23□□□□□ -2.05
PER3P56645 MIR8054-201ENST00000620877 86 ntBASIC2.23□□□□□ -2.05
PER3P56645 RNU6-112P-201ENST00000363599 104 ntBASIC2.22□□□□□ -2.05
PER3P56645 RNU6-818P-201ENST00000364837 108 ntBASIC2.22□□□□□ -2.05
PER3P56645 RNU6-296P-201ENST00000384608 107 ntBASIC2.22□□□□□ -2.05
PER3P56645 RNU6-440P-201ENST00000390882 105 ntBASIC2.22□□□□□ -2.05
PER3P56645 MIR548M-201ENST00000408260 86 ntBASIC2.22□□□□□ -2.05
PER3P56645 RNU7-200P-201ENST00000516105 62 ntBASIC2.22□□□□□ -2.05
PER3P56645 SNORD77.4-201ENST00000516158 81 ntBASIC2.22□□□□□ -2.05
PER3P56645 RNU7-121P-201ENST00000516604 62 ntBASIC2.22□□□□□ -2.05
PER3P56645 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.22□□□□□ -2.05
PER3P56645 MIR5092-201ENST00000583139 88 ntBASIC2.22□□□□□ -2.05
PER3P56645 JPX_2.1-201ENST00000614161 69 ntBASIC2.22□□□□□ -2.05
PER3P56645 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PER3P56645 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PER3P56645 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PER3P56645 SNORA4.2-201ENST00000365313 147 ntBASIC2.21□□□□□ -2.06
PER3P56645 Y_RNA.357-201ENST00000365487 109 ntBASIC2.21□□□□□ -2.06
PER3P56645 RNU6-746P-201ENST00000384112 109 ntBASIC2.21□□□□□ -2.06
PER3P56645 MIR522-201ENST00000385071 87 ntBASIC2.21□□□□□ -2.06
PER3P56645 RNU6-239P-201ENST00000390990 99 ntBASIC2.21□□□□□ -2.06
PER3P56645 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.21□□□□□ -2.06
PER3P56645 RPL23AP42-201ENST00000471152 471 ntBASIC2.21□□□□□ -2.06
PER3P56645 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.21□□□□□ -2.06
PER3P56645 RNA5SP437-201ENST00000517249 129 ntBASIC2.21□□□□□ -2.06
PER3P56645 AC121758.2-201ENST00000553271 193 ntBASIC2.21□□□□□ -2.06
PER3P56645 MIR3133-201ENST00000583157 78 ntBASIC2.21□□□□□ -2.06
PER3P56645 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
PER3P56645 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PER3P56645 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PER3P56645 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PER3P56645 MIR126-201ENST00000362291 85 ntBASIC2.2□□□□□ -2.06
PER3P56645 SNORD114-1-201ENST00000362705 72 ntBASIC2.2□□□□□ -2.06
PER3P56645 RNU6-643P-201ENST00000384018 107 ntBASIC2.2□□□□□ -2.06
PER3P56645 RNU6-187P-201ENST00000384139 106 ntBASIC2.2□□□□□ -2.06
PER3P56645 RNU2-55P-201ENST00000411146 174 ntBASIC2.2□□□□□ -2.06
PER3P56645 HSPE1P9-201ENST00000440046 311 ntBASIC2.2□□□□□ -2.06
PER3P56645 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.2□□□□□ -2.06
PER3P56645 AC055731.1-201ENST00000474387 401 ntBASIC2.2□□□□□ -2.06
PER3P56645 RNA5SP458-201ENST00000516188 119 ntBASIC2.2□□□□□ -2.06
PER3P56645 RNU7-149P-201ENST00000516739 59 ntBASIC2.2□□□□□ -2.06
PER3P56645 RNU2-56P-201ENST00000516826 190 ntBASIC2.2□□□□□ -2.06
PER3P56645 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
PER3P56645 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
PER3P56645 MIR4762-201ENST00000585261 75 ntBASIC2.2□□□□□ -2.06
PER3P56645 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PER3P56645 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PER3P56645 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
PER3P56645 SNORD114-30-201ENST00000364448 72 ntBASIC2.19□□□□□ -2.06
PER3P56645 RNU6-1138P-201ENST00000365359 106 ntBASIC2.19□□□□□ -2.06
PER3P56645 SNORD116-18-201ENST00000383961 92 ntBASIC2.19□□□□□ -2.06
PER3P56645 SNORD23.1-201ENST00000408212 104 ntBASIC2.19□□□□□ -2.06
PER3P56645 MIR1289-2-201ENST00000408360 111 ntBASIC2.19□□□□□ -2.06
PER3P56645 RNA5SP100-201ENST00000410903 110 ntBASIC2.19□□□□□ -2.06
PER3P56645 RNA5SP59-201ENST00000410922 110 ntBASIC2.19□□□□□ -2.06
PER3P56645 AC006461.1-201ENST00000412637 326 ntBASIC2.19□□□□□ -2.06
PER3P56645 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
PER3P56645 OR9P1P-201ENST00000496431 281 ntBASIC2.19□□□□□ -2.06
PER3P56645 RPL23AP63-201ENST00000498752 471 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms