Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.2□□□□□ -1.9
ATP2B4P23634 RN7SKP179-201ENST00000516126 217 ntBASIC3.2□□□□□ -1.9
ATP2B4P23634 RNU1-104P-201ENST00000517280 175 ntBASIC3.2□□□□□ -1.9
ATP2B4P23634 SNORD53-201ENST00000579969 78 ntBASIC3.2□□□□□ -1.9
ATP2B4P23634 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.2□□□□□ -1.9
ATP2B4P23634 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2B4P23634 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATP2B4P23634 RNU6-1019P-201ENST00000364424 107 ntBASIC3.19□□□□□ -1.9
ATP2B4P23634 Y_RNA.273-201ENST00000364703 102 ntBASIC3.19□□□□□ -1.9
ATP2B4P23634 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP2B4P23634 RNA5SP24-201ENST00000516478 95 ntBASIC3.19□□□□□ -1.9
ATP2B4P23634 RPPH1-2P-201ENST00000516688 293 ntBASIC3.19□□□□□ -1.9
ATP2B4P23634 MIR4635-201ENST00000583759 79 ntBASIC3.19□□□□□ -1.9
ATP2B4P23634 MIR4762-201ENST00000585261 75 ntBASIC3.19□□□□□ -1.9
ATP2B4P23634 MIR6715A-201ENST00000615929 79 ntBASIC3.19□□□□□ -1.9
ATP2B4P23634 AC064859.1-201ENST00000624741 174 ntBASIC3.19□□□□□ -1.9
ATP2B4P23634 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.19□□□□□ -1.9
ATP2B4P23634 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATP2B4P23634 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.19□□□□□ -1.9
ATP2B4P23634 RNU6-888P-201ENST00000363010 101 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 U8.5-201ENST00000364528 136 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 Y_RNA.265-201ENST00000364677 108 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 MIR27B-201ENST00000385129 97 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP2B4P23634 AC069257.2-201ENST00000441819 155 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 RNA5SP320-201ENST00000516263 124 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 Y_RNA.686-201ENST00000516548 134 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 RNU6-1270P-201ENST00000517128 108 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 AC090049.2-201ENST00000550377 109 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP2B4P23634 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ATP2B4P23634 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.18□□□□□ -1.9
ATP2B4P23634 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
ATP2B4P23634 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATP2B4P23634 SNORD14E-201ENST00000364009 85 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 SNORD61-201ENST00000384252 73 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 SNRPGP13-201ENST00000442212 177 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 AL606517.2-201ENST00000442855 241 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 Y_RNA.666-201ENST00000516187 112 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 RNU6-659P-201ENST00000516454 104 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 SNORA31.26-201ENST00000517250 137 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 MIR3129-201ENST00000581095 76 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.17□□□□□ -1.9
ATP2B4P23634 U4.3-201ENST00000621047 82 ntBASIC3.17□□□□□ -1.9
ATP2B4P23634 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
ATP2B4P23634 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP2B4P23634 Y_RNA.52-201ENST00000362760 96 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 snoU2-30.1-201ENST00000365012 70 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 RNU6-1292P-201ENST00000383856 107 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 RNU6-442P-201ENST00000383968 104 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 SNORA1-201ENST00000384107 130 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 RNA5SP109-201ENST00000391010 116 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 RNU11-3P-201ENST00000391111 133 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 AL603914.1-201ENST00000401964 204 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 RNU6-693P-201ENST00000516134 107 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
ATP2B4P23634 MIR4658-201ENST00000584344 65 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
ATP2B4P23634 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATP2B4P23634 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.9
ATP2B4P23634 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
ATP2B4P23634 RNU6-1084P-201ENST00000362498 107 ntBASIC3.15□□□□□ -1.91
ATP2B4P23634 MIR891A-201ENST00000401237 79 ntBASIC3.15□□□□□ -1.91
ATP2B4P23634 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.15□□□□□ -1.91
ATP2B4P23634 Y_RNA.690-201ENST00000516603 95 ntBASIC3.15□□□□□ -1.91
ATP2B4P23634 AC084364.2-201ENST00000546924 395 ntBASIC3.15□□□□□ -1.91
ATP2B4P23634 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.15□□□□□ -1.91
ATP2B4P23634 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATP2B4P23634 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATP2B4P23634 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATP2B4P23634 Y_RNA.294-201ENST00000364916 102 ntBASIC3.14□□□□□ -1.91
ATP2B4P23634 MIR597-201ENST00000384968 97 ntBASIC3.14□□□□□ -1.91
ATP2B4P23634 RNA5SP465-201ENST00000391195 109 ntBASIC3.14□□□□□ -1.91
ATP2B4P23634 MIR5094-201ENST00000578766 85 ntBASIC3.14□□□□□ -1.91
ATP2B4P23634 SNORA28-201ENST00000606769 126 ntBASIC3.14□□□□□ -1.91
ATP2B4P23634 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ATP2B4P23634 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATP2B4P23634 RNA5SP289-201ENST00000362332 137 ntBASIC3.13□□□□□ -1.91
ATP2B4P23634 SNORA3.2-201ENST00000408221 125 ntBASIC3.13□□□□□ -1.91
ATP2B4P23634 RNA5SP492-201ENST00000411330 114 ntBASIC3.13□□□□□ -1.91
ATP2B4P23634 MTATP6P21-201ENST00000440681 189 ntBASIC3.13□□□□□ -1.91
ATP2B4P23634 RNU7-107P-201ENST00000459121 61 ntBASIC3.13□□□□□ -1.91
ATP2B4P23634 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.13□□□□□ -1.91
ATP2B4P23634 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.13□□□□□ -1.91
ATP2B4P23634 MIR8054-201ENST00000620877 86 ntBASIC3.13□□□□□ -1.91
ATP2B4P23634 ZNF658B-202ENST00000615961 3375 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATP2B4P23634 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ATP2B4P23634 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
ATP2B4P23634 RNU6-235P-201ENST00000362644 107 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 MIR518A2-201ENST00000384966 87 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ATP2B4P23634 RNU6-440P-201ENST00000390882 105 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 STAG3L5P-204ENST00000443759 179 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 RNU2-60P-201ENST00000517290 128 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 MIR3121-201ENST00000579680 77 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 AC006441.5-201ENST00000612680 209 ntBASIC3.12□□□□□ -1.91
ATP2B4P23634 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.12□□□□□ -1.91
ATP2B4P23634 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms