Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 RBM17P1-201ENST00000453646 1190 ntBASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 AC093525.10-201ENST00000625130 1569 ntBASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP4E1Q9UPM8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 UNC93B2-201ENST00000285383 730 ntBASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 CRYGFP-201ENST00000418459 633 ntBASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 AC093827.2-201ENST00000512654 315 ntBASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 MIR4497-201ENST00000583208 89 ntBASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 AL512353.2-201ENST00000448759 1962 ntBASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4E1Q9UPM8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 KRT17P2-201ENST00000300992 1314 ntBASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 AL031598.1-201ENST00000561511 1773 ntBASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP4E1Q9UPM8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
AP4E1Q9UPM8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 AL355075.4-201ENST00000554988 638 ntBASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 AP005242.2-201ENST00000580065 1175 ntBASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 AC066615.1-201ENST00000640911 628 ntBASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms