Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 MIR940-201ENST00000401276 94 ntBASIC20.03■□□□□ 0.8
CHD7Q9P2D1 AC005104.2-201ENST00000427818 678 ntBASIC20.03■□□□□ 0.8
CHD7Q9P2D1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 RPL13AP23-201ENST00000480739 586 ntBASIC20.02■□□□□ 0.8
CHD7Q9P2D1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 BNIP3P18-201ENST00000593976 575 ntBASIC20.02■□□□□ 0.8
CHD7Q9P2D1 AL592071.1-201ENST00000611956 408 ntBASIC20.02■□□□□ 0.8
CHD7Q9P2D1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 AL031284.1-201ENST00000419297 478 ntBASIC20.02■□□□□ 0.8
CHD7Q9P2D1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.02■□□□□ 0.8
CHD7Q9P2D1 FAM197Y8-203ENST00000450145 560 ntBASIC20.02■□□□□ 0.8
CHD7Q9P2D1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 AC027796.2-201ENST00000575326 344 ntBASIC20.02■□□□□ 0.8
CHD7Q9P2D1 AL139424.1-201ENST00000607572 797 ntBASIC20.02■□□□□ 0.8
CHD7Q9P2D1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD7Q9P2D1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHD7Q9P2D1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHD7Q9P2D1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHD7Q9P2D1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 AC090616.6-201ENST00000582640 721 ntBASIC20.01■□□□□ 0.79
CHD7Q9P2D1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 PMS2P7-201ENST00000506558 1336 ntBASIC20.01■□□□□ 0.79
CHD7Q9P2D1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHD7Q9P2D1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD7Q9P2D1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CHD7Q9P2D1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHD7Q9P2D1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHD7Q9P2D1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD7Q9P2D1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20■□□□□ 0.79
CHD7Q9P2D1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20■□□□□ 0.79
CHD7Q9P2D1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD7Q9P2D1 IGHV3-22-201ENST00000520721 359 ntBASIC20■□□□□ 0.79
CHD7Q9P2D1 AC009065.1-201ENST00000564055 1225 ntBASIC20■□□□□ 0.79
CHD7Q9P2D1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20■□□□□ 0.79
CHD7Q9P2D1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CHD7Q9P2D1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20■□□□□ 0.79
CHD7Q9P2D1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20■□□□□ 0.79
CHD7Q9P2D1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CHD7Q9P2D1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20■□□□□ 0.79
CHD7Q9P2D1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD7Q9P2D1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD7Q9P2D1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20■□□□□ 0.79
CHD7Q9P2D1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20■□□□□ 0.79
CHD7Q9P2D1 MCCD1P1-208ENST00000445732 328 ntBASIC20■□□□□ 0.79
CHD7Q9P2D1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20■□□□□ 0.79
CHD7Q9P2D1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 KRT18P23-201ENST00000435622 1283 ntBASIC19.99■□□□□ 0.79
CHD7Q9P2D1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms