Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 AL390955.1-201ENST00000428694 934 ntBASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 TSPY17P-201ENST00000450329 467 ntBASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 TSPY15P-201ENST00000457163 923 ntBASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 AC116562.4-202ENST00000641738 218 ntBASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
SDHAF3Q9NRP4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SDHAF3Q9NRP4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 EGLN1P1-201ENST00000531623 762 ntBASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SDHAF3Q9NRP4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SDHAF3Q9NRP4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 KRT8P3-201ENST00000519669 1449 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms