Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 LINC01521-201ENST00000504184 1943 ntBASIC20.93■□□□□ 0.94
RNF39Q9H2S5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 AC243960.7-201ENST00000623532 707 ntBASIC20.92■□□□□ 0.94
RNF39Q9H2S5 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF39Q9H2S5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 AL445228.2-201ENST00000605589 952 ntBASIC20.91■□□□□ 0.94
RNF39Q9H2S5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RNF39Q9H2S5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 MTND4P22-201ENST00000413116 1169 ntBASIC20.9■□□□□ 0.94
RNF39Q9H2S5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 AP005131.7-201ENST00000610087 611 ntBASIC20.9■□□□□ 0.94
RNF39Q9H2S5 CU459211.1-201ENST00000635667 749 ntBASIC20.9■□□□□ 0.94
RNF39Q9H2S5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF39Q9H2S5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF39Q9H2S5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF39Q9H2S5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF39Q9H2S5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.89■□□□□ 0.94
RNF39Q9H2S5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.89■□□□□ 0.94
RNF39Q9H2S5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
RNF39Q9H2S5 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF39Q9H2S5 AC008543.2-201ENST00000436907 1383 ntBASIC20.89■□□□□ 0.93
RNF39Q9H2S5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 AC007041.1-201ENST00000438989 1155 ntBASIC20.89■□□□□ 0.93
RNF39Q9H2S5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 KRT18P35-201ENST00000510488 1269 ntBASIC20.89■□□□□ 0.93
RNF39Q9H2S5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 AL049597.2-201ENST00000565575 961 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms