Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SPTBN4Q9H254 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SPTBN4Q9H254 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18■□□□□ 0.47
SPTBN4Q9H254 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18■□□□□ 0.47
SPTBN4Q9H254 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18■□□□□ 0.47
SPTBN4Q9H254 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPTBN4Q9H254 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18■□□□□ 0.47
SPTBN4Q9H254 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18■□□□□ 0.47
SPTBN4Q9H254 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18■□□□□ 0.47
SPTBN4Q9H254 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPTBN4Q9H254 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SPTBN4Q9H254 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18■□□□□ 0.47
SPTBN4Q9H254 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 AL139400.1-201ENST00000366220 510 ntBASIC17.99■□□□□ 0.47
SPTBN4Q9H254 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 AC021087.4-201ENST00000563761 564 ntBASIC17.99■□□□□ 0.47
SPTBN4Q9H254 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPTBN4Q9H254 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 AC022494.1-201ENST00000466044 728 ntBASIC17.98■□□□□ 0.47
SPTBN4Q9H254 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 DPP3P2-201ENST00000416030 1696 ntBASIC17.98■□□□□ 0.47
SPTBN4Q9H254 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.98■□□□□ 0.47
SPTBN4Q9H254 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 TSEN15P1-201ENST00000423257 515 ntBASIC17.97■□□□□ 0.47
SPTBN4Q9H254 RN7SL606P-201ENST00000472779 293 ntBASIC17.97■□□□□ 0.47
SPTBN4Q9H254 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 MIR4745-201ENST00000577608 62 ntBASIC17.97■□□□□ 0.47
SPTBN4Q9H254 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPTBN4Q9H254 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 C20orf181-201ENST00000623918 480 ntBASIC17.96■□□□□ 0.47
SPTBN4Q9H254 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPTBN4Q9H254 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms