Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.83■□□□□ 0.12
CCL13Q99616 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCL13Q99616 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL13Q99616 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.83■□□□□ 0.12
CCL13Q99616 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL13Q99616 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL13Q99616 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CCL13Q99616 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL13Q99616 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL13Q99616 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 AC087499.1-201ENST00000418141 1075 ntBASIC15.82■□□□□ 0.12
CCL13Q99616 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL13Q99616 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL13Q99616 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCL13Q99616 NAPSB-206ENST00000562112 1266 ntBASIC15.82■□□□□ 0.12
CCL13Q99616 C2orf69P3-201ENST00000565542 1120 ntBASIC15.82■□□□□ 0.12
CCL13Q99616 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL13Q99616 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL13Q99616 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CCL13Q99616 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCL13Q99616 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL13Q99616 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCL13Q99616 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL13Q99616 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL13Q99616 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL13Q99616 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL13Q99616 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL13Q99616 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL13Q99616 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL13Q99616 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
CCL13Q99616 AC073912.3-201ENST00000624414 853 ntBASIC15.81■□□□□ 0.12
CCL13Q99616 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CCL13Q99616 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCL13Q99616 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL13Q99616 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL13Q99616 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL13Q99616 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL13Q99616 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 AC087289.5-201ENST00000586076 3175 ntBASIC15.8■□□□□ 0.12
CCL13Q99616 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.8■□□□□ 0.12
CCL13Q99616 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCL13Q99616 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
CCL13Q99616 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.8■□□□□ 0.12
CCL13Q99616 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.8■□□□□ 0.12
CCL13Q99616 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL13Q99616 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL13Q99616 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.8■□□□□ 0.12
CCL13Q99616 AC010947.1-201ENST00000623454 693 ntBASIC15.8■□□□□ 0.12
CCL13Q99616 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCL13Q99616 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL13Q99616 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms