Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC01465-201ENST00000408887 1940 ntBASIC19.87■□□□□ 0.77
ATP2A3Q93084 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 AC022616.7-201ENST00000525383 220 ntBASIC19.87■□□□□ 0.77
ATP2A3Q93084 AL353719.1-201ENST00000566847 864 ntBASIC19.87■□□□□ 0.77
ATP2A3Q93084 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.86■□□□□ 0.77
ATP2A3Q93084 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 AP000974.1-201ENST00000623909 2387 ntBASIC19.86■□□□□ 0.77
ATP2A3Q93084 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ATP2A3Q93084 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATP2A3Q93084 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.86■□□□□ 0.77
ATP2A3Q93084 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 AC117947.1-201ENST00000427448 529 ntBASIC19.86■□□□□ 0.77
ATP2A3Q93084 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.86■□□□□ 0.77
ATP2A3Q93084 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP2A3Q93084 AC063952.2-201ENST00000498792 1227 ntBASIC19.86■□□□□ 0.77
ATP2A3Q93084 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.86■□□□□ 0.77
ATP2A3Q93084 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
ATP2A3Q93084 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP2A3Q93084 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A3Q93084 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 RNF152P1-201ENST00000397754 604 ntBASIC19.85■□□□□ 0.77
ATP2A3Q93084 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 CKBP1-201ENST00000565489 1086 ntBASIC19.85■□□□□ 0.77
ATP2A3Q93084 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 KRT8P41-201ENST00000533985 1514 ntBASIC19.85■□□□□ 0.77
ATP2A3Q93084 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP2A3Q93084 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A3Q93084 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATP2A3Q93084 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATP2A3Q93084 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ATP2A3Q93084 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.84■□□□□ 0.77
ATP2A3Q93084 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A3Q93084 AC139887.4-201ENST00000607877 719 ntBASIC19.84■□□□□ 0.77
ATP2A3Q93084 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.84■□□□□ 0.77
ATP2A3Q93084 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.84■□□□□ 0.77
ATP2A3Q93084 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A3Q93084 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A3Q93084 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
ATP2A3Q93084 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A3Q93084 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP2A3Q93084 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A3Q93084 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms