Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 AC004951.3-201ENST00000418645 1148 ntBASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 AL596275.1-201ENST00000423464 877 ntBASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 TSPY15P-201ENST00000457163 923 ntBASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 REXO1L10P-201ENST00000615707 1290 ntBASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 REXO1L12P-201ENST00000622156 912 ntBASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 NOC2LP1-202ENST00000452600 2235 ntBASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 FEM1AP3-201ENST00000403722 1741 ntBASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.8■□□□□ 0.44
SIMC1Q8NDZ2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 AC005332.8-201ENST00000622750 2735 ntBASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 AC026271.3-201ENST00000571884 352 ntBASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 AC026471.5-201ENST00000615068 467 ntBASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 AC006333.2-201ENST00000607957 2099 ntBASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIMC1Q8NDZ2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 AC116562.2-201ENST00000507042 360 ntBASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIMC1Q8NDZ2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIMC1Q8NDZ2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms